Capsella rubella (pink shepherd's-purse): 17886208
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Entry
17886208 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-16
KO
K10357
myosin V
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
17886208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17886208
04131 Membrane trafficking [BR:
crb04131
]
17886208
03029 Mitochondrial biogenesis [BR:
crb03029
]
17886208
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
crb04812
]
17886208
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
17886208
mRNA cycle factors
P-body specific factors
17886208
Membrane trafficking [BR:
crb04131
]
Others
Actin-binding proteins
Myosins
17886208
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
17886208
Cytoskeleton proteins [BR:
crb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
17886208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
IQ
Myosin_N
AAA_16
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
17886208
NCBI-ProteinID:
XP_023639303
LinkDB
All DBs
Position
Unknown
AA seq
1233 aa
AA seq
DB search
MAENIIVDSHVWVEDPERAWIDGVVLNIKGDEAEVKTNDGREIIANLSKLYPKDTEGPSE
GVEDMTRLSYLHEPAVLDNLATRYELNEIYTYTGFILIAVNPFQGLPHLYDAEVMEKYKE
ASCKELSPHVFAIGGIAYREMINEGRNKCILVSGESGSGKTETTKMLMXYFGGHTAAEGR
TVENQVLESNPVLEAFGNAKTVKNNNSSRFGKFVEIQFDDVGRISGAAIRTYLLERSRVC
QVSDPERNYHCFYLLCAAPPEDVERFKLGDPKSFRYLNQSSCYELDGVNDAEEYLATRRA
MDVVGISEKEQDAIFRVVAAILHLGNIEFSKGEDADSSSLKDEQSMFHLEMTSELLMCDP
HSLEDALCKRMMVTPEEVIKRSLDPLGAAVSRDGLAKTIYSRLFDWLVNKINISIGQDSH
SRRLIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFNQHVFKMEQGEYQKEEIDWSYVE
FVDNQDVVDLIEKKPGGIIALLDEACMLPKSTPETFSEKLYHTFKDHKRFMKPKLTRSDF
TLVHYAGDVQYQSDQFLDKNKDYVVAEHQDLLYASKCSFVSGLFPPLPKESSKSKFSSIG
TRFKLQLQQLMETLNSTEPHYIRCVKPNNVLQPTVFDNANVLHQLRSGGVLEAIRVKCAG
YPTNRTFIEFLNRFVILAPEILKGEYEADVACKWILEKKGLTGYQIGKNKVFLRAGQMAE
LDAHRIRVLGESARMIQGQVRTRLTRERFVLMRRASVHIQANWRGNLARKISHNMRREEA
AIKIQKNLRRQIAKKDYGQTKSSALTLQSGVRRMAARHEYRFKLTTRAATVIQAYWRGYS
AISDYKKLKRASLVYQSKLRGRIARKQLGQSKQADTKEEIENERTVELSKRTEEQSDDVE
IGHERKTKNSIEAEDGRDKSFVVHSEPSDDDEIGHERKTKHSIEAEDGNEKTLVMHSDQS
DDEEIRHERKKKHSSEEEDGIEKSFVMHSDQSDDEETGHKRKTKHSIEAEDGIEKSFVMH
SDQSDDEEIGHERKTKHSIQAEDGNEKSLVLDSEKPYNTFSVVSQITEPIRDTEIESLTA
EVEMLKALLQVEKQRADISERKCAEARELGERRRKRLEETERRVYQLQDSLNRLLYSMSD
QFSQLKSILRSPSMSTSTMASAPVVRDDLGDSSENSEASSTDSDFTFPAPSPDNFSTYNT
NQLQVIVQDLSTTEGKGTENYDSDKEGGFEDYF
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaacatcatagtggattctcatgtttgggtggaagacccagaaagagcatgg
attgatggggttgtacttaatatcaagggagatgaagcagaggttaaaaccaatgatggc
agagagattattgctaacttatcaaaactctatccaaaagacactgaaggtccttcagag
ggagtagaggatatgactagattatcttatctgcatgagcctgcagttctcgacaatttg
gcaaccagatatgaactcaatgaaatttatacttatacaggattcattcttattgctgtc
aatccctttcaaggactcccccatctctatgatgctgaggttatggaaaagtacaaggaa
gcctcgtgcaaagagctgagtcctcatgtttttgcaattggtggcatcgcctatagggaa
atgattaatgaaggcaggaacaaatgtatattggtcagtggtgaaagtggttctggaaag
acagaaacgactaagatgctcatgncatactttggagggcatactgcagctgaaggaagg
acagttgaaaaccaagttctagaatcaaatcccgttctcgaggcatttggaaatgcgaag
actgttaagaacaacaattctagtcgttttgggaaatttgtggagattcaatttgatgac
gtgggccgaatatcaggggcagccatcagaacttaccttttggagaggtcacgtgtttgc
caagtttcagatcctgaacgtaactatcactgcttttatctcctgtgtgctgctcctcca
gaggatgttgagaggtttaaattgggagatcctaagtcatttcgctatcttaatcaatct
agctgctacgaacttgatggtgtaaatgatgcagaagagtatcttgctaccagaagggct
atggatgtagttggaataagtgaaaaagaacaggatgcaattttcagagttgtggctgcc
atcctccatcttggaaatattgaattttcgaagggagaagatgctgattcatcatctcta
aaagatgaacagtcaatgtttcatctcgaaatgacatcagaactgctcatgtgtgatccc
cattccttggaggatgctttgtgtaagcgtatgatggtcaccccagaagaagttatcaag
agaagtcttgatcctcttggcgctgctgttagcagggatggtttagcaaaaacaatatat
tctagactctttgattggttggttaacaaaataaatatctctattgggcaagattctcac
tctaggcgcttgatcggagtccttgacatttatggttttgagagcttcaaaaccaacagt
tttgaacaattctgtattaattacacgaatgaaaagctgcaacagcatttcaaccagcat
gtatttaaaatggaacaaggtgaatatcagaaagaagaaatagattggagctatgtggag
tttgttgataatcaagatgttgtggatctgattgaaaagaaaccgggtggtatcattgct
cttctagatgaagcatgcatgctcccaaaatcaactcctgaaacattttctgagaaactg
tatcacacattcaaggatcataagcgcttcatgaaaccaaaattgactcgttcagatttt
acattagttcattatgcaggggatgttcaataccagtccgatcaatttttagacaaaaac
aaagactatgttgttgctgagcatcaagacttgttatatgcttctaaatgctcctttgtg
tcaggcctctttcctcctcttcctaaagagagtagcaaatctaagttttcctcaattggt
actcgtttcaagctacaattgcaacagctgatggagacactgaactctacggaaccccac
tacatcagatgtgttaagccaaacaatgtgttgcaaccaacagtgtttgacaatgccaat
gtcttgcatcaattacgatctgggggtgttcttgaggccattagagtgaaatgcgctgga
tatccaacaaataggactttcattgagttcttaaatcgatttgtcattcttgcaccggaa
attctgaaaggagagtatgaagcagatgttgcatgcaaatggattttggagaaaaagggg
cttacaggttaccagattggaaaaaataaagttttcctaagagctggtcagatggccgag
ctagatgcacacagaataagagtgcttggcgaatcagcgaggatgatacagggacaagtt
agaacccgtctaacaagagaacgatttgttctcatgcggagggcttcagttcatatacag
gctaactggagaggaaatcttgcacgaaagatatcccataacatgagaagggaggaggct
gccattaaaatccagaaaaacttacgtagacagattgccaagaaagattacggacagacc
aaatcttccgcactcaccttgcagagtggagtccgcagaatggctgcacgtcatgaatac
cgttttaaattaacgactagagcagcaactgtgattcaggcatattggcgtggttacagt
gctatatctgactacaagaaattgaaaagagcttctcttgtttatcaaagtaaactgaga
ggaagaattgccagaaaacagttaggacagtcaaagcaggctgacacaaaagaagagata
gaaaatgaaagaacggtggaactttccaaaagaacagaagagcaaagtgatgatgtagag
attggacatgaacgaaagacaaaaaattccatcgaagcagaagatggacgtgataagtcc
tttgtagtgcattcagagccaagtgatgatgacgagatagggcatgaaagaaagacaaaa
cattccatcgaagcagaagatggaaatgagaagaccttagtaatgcattcagatcaaagt
gatgatgaagagatacgacatgaaagaaagaaaaaacattccagtgaagaggaagatgga
attgagaagtcctttgtgatgcattcagatcaaagtgatgatgaagagacaggacataaa
agaaagacaaaacattccatcgaagcagaagatggaattgagaagtcctttgtaatgcat
tcagatcaaagtgatgatgaagagataggacatgaaagaaagacaaaacattccatccaa
gcagaagatggaaatgagaagtccttggttctcgattcagagaagccttacaacacgttt
tctgttgttagccaaataacggaacctattcgtgacacagaaattgaatccctcactgca
gaagttgagatgctgaaggccttgttgcaagtagagaaacaaagagctgacatttccgaa
agaaaatgtgctgaagcccgagaacttggggagagaaggcgtaaaagattagaagaaaca
gaaagaagagtttaccaactacaagactctttgaacaggttgttatattctatgtcggac
caattctcacaattaaagtccatcttaagatctccttctatgtcaacttcaacaatggcc
tcagcgccagttgtgcgtgatgatcttggtgacagctctgagaactctgaagcttcatca
accgattctgatttcacttttcctgctccttccccagacaatttctcgacgtataacacg
aatcagctgcaagtcattgttcaggatctctcgaccacagaaggcaaaggaacagagaat
tatgacagtgataaggaaggaggctttgaagattacttttga
DBGET
integrated database retrieval system
