Capsella rubella (pink shepherd's-purse): 17886274
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Entry
17886274 CDS
T02984
Name
(RefSeq) WD repeat-containing protein LWD2
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
17886274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17886274
03036 Chromosome and associated proteins [BR:
crb03036
]
17886274
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
17886274
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
17886274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
17886274
NCBI-ProteinID:
XP_006291421
UniProt:
R0H4U7
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MVTSNDQIQDGSDEQSKRSEIYTYEAPWQIYAMNWSIRRDKKYRLAITSLIEQYPNRVEI
VQLDESNGEIRSDPNLSFEHPYPPTKTSFIPDKECQRPDLLATSSDFLRLWRIADDDSRV
ELKSCLNSDKNSEFSGPITSFDWNEAEPRRIGTSSIDTTCTIWDIEREVVDTQLIAHDKE
VYDIAWGGVGVFASVSEDGSVRVFDLRDKEHSTIIYESGEPSTPLVRLSWNKQDPRYMAT
VIMGSAKIVVLDIRFPALPVVELQRHQASVNAIAWAPHSSSHICTAGDDSQALIWDISSM
GQHVEGGLDPILAYTAGAEVEQLQWSSSQPDWVAIAFSNKLQILRV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggttacgagcaacgatcaaatccaagatggttctgatgagcaatcgaaaagatcagag
atttacacatacgaagcaccatggcagatctacgcaatgaactggagcattcgtcgagac
aagaagtatcgactcgcaatcacaagcctcatcgagcaatatccgaatcgcgtcgagatt
gttcagcttgatgaatcaaatggtgagattcgatcagatccgaatcttagcttcgagcat
ccgtacccaccaaccaaaaccagtttcatccccgataaagagtgtcaaagacccgatctt
ttagctacctcgagtgattttcttcgtttatggcgaatcgctgatgatgattctcgtgtt
gagcttaagtcttgtcttaatagtgataagaatagtgagtttagtggtccgattacttca
tttgattggaatgaagctgagcctagacgaattggtacttctagtattgatacgacttgt
acgatctgggatatagagcgtgaagttgtggatactcagcttattgctcatgataaagag
gtttatgatattgcttggggtggagttggtgtctttgcttctgtctcagaggatggttct
gttagagtattcgatctccgtgataaggagcattcgacgattatctatgagagtggtgag
cctagtactcctttggtgcgtcttagttggaacaagcaggatccgaggtatatggctact
gtgatcatgggcagtgctaaaattgtggtgcttgacattcggtttccggctcttcctgtt
gtggagcttcagcgacatcaggctagtgtcaatgctattgcttgggctcctcatagctcc
tcccatatctgtactgctggtgatgattctcaggcgttgatttgggatatctcttcaatg
ggacagcatgttgaaggtggtctggatccaattctagcttacacagctggcgctgaggtt
gagcagctgcagtggtcttcttcccagcctgattgggttgccattgccttctctaacaag
ctgcagattctcagggtctga
DBGET
integrated database retrieval system
