KEGG   Capsella rubella (pink shepherd's-purse): 17886515
Entry
17886515          CDS       T02984                                 
Name
(RefSeq) SKP1-like protein 16
  KO
K03094  S-phase kinase-associated protein 1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03083  Polycomb repressive complex
crb04120  Ubiquitin mediated proteolysis
crb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    17886515
   04120 Ubiquitin mediated proteolysis
    17886515
  09126 Chromosome
   03083 Polycomb repressive complex
    17886515
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:crb04131]
    17886515
   04121 Ubiquitin system [BR:crb04121]
    17886515
   03036 Chromosome and associated proteins [BR:crb03036]
    17886515
Membrane trafficking [BR:crb04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    17886515
Ubiquitin system [BR:crb04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     17886515
   Cul7 complex
     17886515
Chromosome and associated proteins [BR:crb03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     17886515
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     17886515
SSDB
Motif
Pfam: Skp1 Skp1_POZ AbiJ_NTD4 DarP
Other DBs
NCBI-GeneID: 17886515
NCBI-ProteinID: XP_006291940
UniProt: R0HLP2
LinkDB
Position
Unknown
AA seq 170 aa
MSSNKIELTSSDGETFVIDEAVARKFQIVAHMIDDDCAHRAIPLANVTGPVLAMAIEFCK
KHVDDGKDSTEATKDKEEEQEAKEKELKAWDDEFIKDKDIDTIFKLILAANYLNVKDLLE
LTCQTTADYIKDKSPEEIREIFGIENDFTAEEEAKVRKDNAWAFEADPKP
NT seq 513 nt   +upstreamnt  +downstreamnt
atgtcttcgaacaagattgagttgactagctccgatggtgaaactttcgtgattgacgaa
gcggtggctcgtaaattccagatcgttgcgcacatgatcgacgatgactgcgcacataga
gcaatcccgcttgcaaacgtcactggtccggtcctagcgatggccatcgagttctgcaag
aaacatgtcgacgatggtaaagattcaaccgaagcaaccaaggacaaagaagaagaacaa
gaagccaaggagaaggagctcaaggcttgggacgatgagttcattaaagataaggatatc
gacacaatctttaaactcattctcgctgcaaactatctcaacgtcaaagaccttctcgag
ctcacttgccagaccactgctgattacatcaaggacaagtcaccagaggagatccgagag
atctttggcatcgagaacgatttcacagccgaagaagaagcaaaggttcgcaaggacaac
gcgtgggcttttgaagctgatccaaaaccctaa

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