KEGG   Capsella rubella (pink shepherd's-purse): 17886567
Entry
17886567          CDS       T02984                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03020  RNA polymerase
crb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    17886567
  09124 Replication and repair
   03420 Nucleotide excision repair
    17886567
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crb03021]
    17886567
   03400 DNA repair and recombination proteins [BR:crb03400]
    17886567
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     17886567
  RNA polymerase III system
   RNA polymerase III
     17886567
  RNA polymerase I system
   RNA polymerase I
     17886567
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      17886567
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 17886567
NCBI-ProteinID: XP_006293269
UniProt: R0FTH9
LinkDB
Position
Unknown
AA seq 219 aa
MEVKENGTAPLPCLSKYVDPSSEESHRYYLARRNALVMLRDRGYDVSSEDISLSLDDFRN
VYGERPDVDRLRISAKHISDPSKKVKIVFFSGMVKVNAIRSIAADVLSQETITGLIIILQ
SHVTNQALKAIELFPFKVEIFQITDLLVNITEHILKPEHRVLDDKQKKRLLKKFSIEEKQ
LPRVSKKDAIVRYYGLEKGQVVKVNYRGELTHVAYRCVW
NT seq 660 nt   +upstreamnt  +downstreamnt
atggaggtgaaagagaacgggacagctccgcttccgtgtctgagcaaatacgtggatcca
tcgagtgaagagagtcatagatactatcttgcgcggcgaaatgctttggtgatgctccga
gacagaggctacgacgtctcctccgaagatatcagtctctccctcgacgattttcgaaat
gtttacggcgaacgtcccgatgttgaccgtctccgtatctctgctaaacacatctccgat
ccttccaaaaaggtaaagattgtcttttttagtggcatggttaaagtcaacgcaatccgt
agtatagcggcggatgtactcagccaagaaaccataaccgggcttataataattctgcaa
agccatgtaaccaatcaagccttgaaagccatcgaactttttccattcaaagtcgagata
ttccagataactgacctgctagtcaacataacggaacatatactgaagccagaacatcga
gttctggatgataaacagaagaaaaggcttctgaagaagttcagcatcgaggaaaaacag
cttcctcgggtttcaaagaaagatgcgatcgtccggtactacggattagagaaagggcaa
gttgtgaaggtgaattacagaggtgaactcacacatgttgcctaccgatgtgtgtggtga

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