KEGG   Capsella rubella (pink shepherd's-purse): 17886594
Entry
17886594          CDS       T02984                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X2
  KO
K10846  DNA excision repair protein ERCC-5
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    17886594
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:crb03400]
    17886594
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     17886594
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 17886594
NCBI-ProteinID: XP_006290497
UniProt: R0HEC9
LinkDB
Position
Unknown
AA seq 1488 aa
MGVQGLWELLAPVGRRVSVETLANKRLAIDASIWMVQFIKAMRDEKGDMVQNAHLIGFFR
RICKLLFLRTKPIFVFDGATPALKRRTVIARRRQRENAQTKIRKTAEKLLLNRLKDMRLK
EQAKDIKNQRLKQDDSDRKKKRVSSDSVHDNLRDSAKKDDVGSSFFVEGKLDEISPASMG
GENGVGDVIRESTNDDPKGKGVLLDEDELDNKMKCNLEQDSSVQGKNYQEKLDEMLAASL
AAEEEGNFSSKASTSAAAISSEEEDSDEDEEMLLPVMDGDVDPAVLASLPPSMQLDLLVQ
MREKLMAENRQKYQKVKKAPEKFSELQIEAYLKTVAFRREINEVQRSAGGRAVGGVQTSR
IASEANREFIFSSSFAGDKEVLVSAREGRNDENQTNTSRLSLPVPVKNASSQKKSDATIE
LDRDEPTNPDENIEVYKDERGRFRIRNRHMGIQMTRDIQRNLHLIKEKERTASGSMGNND
ETLNAWENFPTEDQFLENSPVEEDDVVNLEIQNDDSMLQNPSSIEISFEHDGGENDLNDE
DDMFLQLAAGGPVTISSTENDPKEDSSPWASDSDWEEVPVEQNTSVTKLEVYSSNQHIPK
DISIDEGAAREENSFENVSNSTENDTVTKYTKGYLEEEADLQEAIKKSLLELHDKDSGDI
LLEENKSVRVNLVDKPRQDSLCSKETVGDAEEEGFLDEITISKTSGAINEQSNTSVAENP
DGQKGITKQFGTHPTSGSNNFSSVVSNELPKVKSVISPEKASNVSSQSYMLSSMAKHHNE
ESSVSFDGESVKVSAMPIADEERTGFIGDTSICGSVKKGNADSDASIMMDDKRDSRRKVQ
SPVTESEDPFSDVIRSQIGILHDTDSQNERREENYSNEHTFNIDSSTCLEEKDVPVEFSE
ANLEEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFTECQELLQFFGIPYIIAPMEAEAQ
CAFMEQSNLVDGIVTDDSDVFLFGARSVYKNIFDDRKYVETYFMKDIEKELGLSRDKIIR
MAMLLGSDYTEGISGIGIVNAIEVVTAFPEDDGLQKFREWVESPDPTILGKTDAKTGSKV
KKRGSASVDDKEIISGASTDDTEEIKQIFMDQHRKVSKNWHIPSTFPSEAVISAYLNPQV
DRSTETFSWGKPDLSVLRKLCWEKFGWNGKKTDDLLLPVLKEYEKRETQLRMEAFYSFNE
RFAKIRSKRINKAVKGIGGGLSSDVAEGTKNRNKKRVAPRETEDNNTSDKDSPKADEKVK
NKKKCLEKPSSSRGRGRAQKRVRGRGRGRVQKDLLELSDGTSDDDDKVVELQAKPSNLQK
VRRSTRSRNPVKYNVKEEDELNESRSHGESPIEILEDNDESGIGNVSAERTQNETTIDEA
SINNCPSEDYIQTGGGFCTDEADEIGDAHLEDKSTDDYRVIGGGFCVDEDETAEEDEIES
EERKKKGKRRNEEDNASVETNIEIDFGNSSVGGGLSAMPFLKRKKRKS
NT seq 4467 nt   +upstreamnt  +downstreamnt
atgggagtgcaaggtctttgggagcttcttgctcctgtaggtcgtcgtgtctccgtcgaa
acccttgccaacaaacgattagccatcgatgcgagtatatggatggtacagtttatcaaa
gcgatgcgtgacgagaagggagatatggttcagaacgcacacttgatcggttttttccga
aggatttgtaagcttttgttcttaaggactaaaccgatctttgtatttgacggagccact
ccggcattgaaacgccgtactgttattgctcgccgtcgtcagcgtgagaatgcacagact
aaaatccgtaaaaccgctgagaaattgctgcttaatcggcttaaggatatgaggctgaag
gaacaagctaaagatattaagaatcaaagactgaagcaggatgatagtgatagaaagaag
aaacgtgtgtcctctgattctgtgcatgataatttgcgagattcggcgaagaaagatgat
gtagggagtagtttttttgtggagggaaagctagatgagatatctccagcatctatgggt
ggagaaaatggtgttggtgatgtcattagagagtccacgaatgatgatcccaagggaaag
ggcgttttgttggatgaggatgaactagataacaaaatgaagtgtaatcttgaacaggat
tcctcagtgcaggggaagaattatcaggaaaagttggatgagatgttggcggcatccctt
gcagcagaagaagaaggaaactttagtagcaaagcatcaacttcagctgcagcaatctca
tctgaggaggaggacagcgacgaagatgaggaaatgttactgccagtaatggatggggat
gtcgacccagctgttttggcttctcttcctccatctatgcaacttgatctccttgttcag
atgagagaaaaattgatggcagaaaaccggcaaaagtaccaaaaggtcaagaaggcccct
gaaaagttttctgaattacaaatagaagcatatcttaaaactgtagccttccgtcgggaa
ataaatgaagttcagagatctgctggtggaagggctgttggtggagttcaaacttctagg
atagcttcggaagcaaacagagagtttatattctcatcttcctttgctggtgataaagaa
gtacttgtgtctgctagagaaggaagaaatgatgaaaatcaaacgaatacgtcacgactg
tctttgccagtccctgttaagaatgcttcctcgcagaaaaaatcagatgctaccattgaa
ttggatagagatgaacctacaaatcctgatgaaaatattgaagtatataaagatgaaagg
gggcgatttagaataaggaacagacacatgggaatccagatgacacgtgatatccagagg
aacttacatttgataaaagaaaaggagagaacagcttctgggtctatgggtaataatgat
gaaacactcaacgcctgggagaactttcctactgaagaccaatttcttgaaaattcacct
gttgaagaagatgatgttgtaaacctggagatccagaatgatgattccatgctgcaaaat
ccatcttcaatagagatatcatttgaacatgatggtggtgaaaatgatctcaatgacgaa
gatgatatgtttcttcagttggcagcaggaggaccagtgacaatcagttccacagaaaat
gatcctaaagaagactcttcaccgtgggcttctgacagtgattgggaagaagtacctgtt
gaacagaatacttctgttactaaactcgaagtatattcaagtaatcagcatatccctaag
gatattagtattgatgagggagcagcaagggaagaaaatagttttgaaaatgtcagtaat
tccaccgagaatgatacagtaacaaagtacacaaaaggctatttggaagaagaagctgat
ctacaggaggctatcaagaaaagtcttcttgaattacatgataaggattccggggatatc
cttcttgaagaaaataaatcagtaagggtaaatcttgttgacaagcctagacaagatagt
ctttgttctaaggaaaccgttggtgatgctgaggaagagggatttctggacgaaataaca
atctcgaaaaccagtggtgctataaatgagcagtccaacacttctgtagctgagaatcca
gatggtcagaaagggataaccaaacaatttggtacacatcctacttccggttctaataac
tttagcagtgttgtgagcaatgaattgccaaaggtaaaatcagttatctcaccagagaaa
gcatctaatgtttctagtcaaagctacatgctgtcctctatggctaaacatcacaatgaa
gaaagttctgtaagttttgatggagaatctgtcaaagtgtctgctatgcccatagctgat
gaggagagaactggttttattggtgacacatctatttgcggtagtgtcaaaaaaggtaat
gctgacagtgacgcatcgatcatgatggatgataagagagatagtagacgcaaagtccag
agtcctgtcactgaatcagaggacccttttagtgatgtcatcagatcgcaaataggaata
ctacatgacacagattcacagaatgaaagaagggaggaaaattactctaacgagcacact
ttcaatattgacagttcaacatgtttagaagaaaaagacgtacctgttgagttttcagaa
gcaaatttagaggaggaaattcgagttctcgaccaagaattcgtaagtttaggggatgaa
cagaggaaacttgagcggaatgctgaatctgtgagcagtgagatgtttacagaatgccag
gagctactccaattttttggcataccatacatcatagctcccatggaagcagaggcacag
tgtgcatttatggaacaatcaaaccttgttgatggcattgtcactgacgattctgatgta
ttcttatttggagcaaggagcgtgtacaaaaacatatttgatgatcgcaaatatgtggag
acatactttatgaaggacattgagaaggagctaggcttgagcagagataaaataatccgc
atggcaatgcttctaggaagtgattacacagaaggaatcagtggtattggtattgtcaat
gctattgaagttgtgactgcttttcctgaggacgatgggcttcagaaatttcgtgaatgg
gttgagtcacctgatccaaccattttaggaaagactgatgcaaaaacaggttcgaaggtg
aaaaagcgtgggtctgcctctgtagatgataaagaaatcatctcaggtgcctcgactgat
gacactgaagaaataaagcaaatcttcatggatcagcatagaaaggtaagcaagaattgg
catattccatcgactttccctagtgaggctgttatttcagcctacttaaatccacaagtg
gatcggtcgactgagactttctcatggggcaagcctgatctttcagttcttagaaagcta
tgctgggaaaagtttggttggaacggcaagaaaacagatgatctactactaccagtcttg
aaggagtacgaaaagcgcgagacgcaacttcggatggaagctttctattcctttaatgaa
agatttgcaaagatccgtagtaaaagaatcaacaaagctgtcaaaggaattggcggaggt
ctatcgtcagatgtggctgaaggtacaaaaaaccgaaataagaaaagagttgctcctcgt
gaaactgaagataacaacacttcagataaagattcacctaaagctgatgagaaagtgaaa
aacaaaaagaagtgcttagaaaaaccatctagtagtagaggcagaggcagagcccagaaa
agagtacgaggaagaggaagaggaagagtccaaaaagatctccttgagctatcagacggc
acttctgatgatgatgacaaggtagtagaattgcaggcaaaaccgagcaatcttcaaaaa
gtgcgaaggtcaacacgatctcggaatcctgtgaagtacaatgtgaaagaagaagatgaa
ttgaacgagtcaagaagccatggagaatcccctattgagattttggaagataatgacgaa
agcggaataggaaatgtctctgcagaaagaacacagaatgaaacaaccatcgatgaggca
tcaatcaacaactgtccttctgaagattatattcaaacgggaggtgggttctgtacagat
gaagctgatgagattggagatgctcatttggaagataaatctaccgatgattacagagtg
attggtggcggattctgcgtagatgaagacgaaacagcagaggaagatgaaatcgagagt
gaagaacggaaaaagaaaggtaaacgtcgaaacgaagaagataatgcatcagtagagaca
aatattgagattgattttgggaactcttcagttggaggaggattaagtgctatgcctttc
ttgaagcgaaagaaaaggaagagctga

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