Capsella rubella (pink shepherd's-purse): 17886689
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Entry
17886689 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 18
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17886689
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17886689
04147 Exosome [BR:
crb04147
]
17886689
04090 CD molecules [BR:
crb04090
]
17886689
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17886689
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17886689
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17886689
CD molecules [BR:
crb04090
]
Proteins
17886689
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_15
AAA_16
Zeta_toxin
AAA_22
AAA_21
AAA_23
AAA
RsgA_GTPase
AAA_28
DUF87
DEAD
DLIC
HUTI_composite_bact
Motif
Other DBs
NCBI-GeneID:
17886689
NCBI-ProteinID:
XP_023638075
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MTYWVKITKKRGWRKNKMKIKSWGSIKSIFMQADGVDLMLMALGLIGAVGDGFITPMIFF
ICSKLLNDFGGFSFNDETFIQAISKNXCIFCWEHNAIALLYVACASLVICFLEGYCWTRT
GERQAAKMREKYLIAVLRQDVGYFDLNVTSTSDAVTSVSSDSLVIQDFISEKLPNFLMNV
YAFVGSYIVGFVLLWRLTIVGFPFIVLLLIPGLMYGRALINISRKIREEYNVAGSIAEQA
IASVRTVYAFSSEKKMIENFSNALQGSVKLGLRQGLAKGIAIGSNGITYAIWGFMTWYGS
RLVMKHGSKGGTVSTVIVCVTFGGTSLGQSLSNLKYFSEAFVAAERMIKLIKRVPDIDSN
NLEGQILEKTRGEVEFNHVKFTYPSRPLTTIFDDFCLRVPSGKTVALVGGSGSGKSTVIS
LLQRFYDPIAGEILIDGMPIHKLQVKWLRSQMGLVSQEPVLFATSITENILFGKEDASMD
EVVEAAKASNAHNFISQFPNSYKTQVGERGVQLSGGQKQRIAIARAIIKSPIILLLDEAT
SALDSESERVVQEALENASVGRTTIVIAHRLSTIRNADIICVVQNGRITETGSHDELLEK
LDGHYTSLIHLQQMENKESDININVSVKEGQQRSLGKDLKYSPNEYIHSTTSSNIVTDFS
DMTPKDNKSRVPSFKRLMAMNRPEWKHALYGCVGAALFGAVIPIYAFSTGAMVTVFFLTS
HEEMKEKTRIYVLVFVGLALCTFLTNISQHYNFAYMGEYLTKRIREHMLGKILTFEVNWF
DEDENSSGAVCSRLANDANVVRSLVGDRMSLLVQTISAVSITCTIGLVISWRFAIVMISV
QPLVVVCFYTRNILLKRMSKIAINAQDESTKLASEAVSNIRTITAFSSQERIIELFKRAQ
EGPRRESARQSWLAGIMLGTSQGLITCVSALNFWYGGKLVADGKMVSKEFLEIFMIFSST
GRLIAEAGTMTKDLAKGSDAVASVFAVLDRCTTIEPENLDGYVPKKIKGQIRFLNVDFSY
PTRPDVTIFKNFSIDIDAGKSTAIVGPSGSGKSTIISLIERFYDPLKGIVKIDGHDIRSY
HLRSLRRHIALVSQEPTLFSGTIRENIMYGGAYNKINESEIIEAAKAANAHDFIISLSGG
YDTYCGDKGVQLSGGQKQRIAIARAVLKNPSVLLLDEATSALDSQSERVVQDALERLMVG
RTSVVIAHRLSTIQNCDMITVLDKGEVVECGTHSSLLAKGPMGAYFSLVSLQRTLG
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgacatattgggttaagataacgaagaagagaggttggaggaagaacaagatgaagata
aagagttggggaagcataaaatcgatatttatgcaagcggacggtgtagatttgatgttg
atggcattaggcttaatcggagccgtaggtgatggcttcattactcctatgatatttttc
atatgcagcaaactactcaacgactttggtggcttctctttcaatgatgagactttcata
caagccatctccaagaactaatgtattttctgttgggaacataatgcaatagctttgctt
tatgtggcttgtgcatcattggtcatatgtttccttgaaggatattgctggacaagaaca
ggggagagacaagccgcaaaaatgagagagaagtatttaatagcggtgttaagacaagat
gtgggttactttgatcttaatgtcacaagcacttctgatgctgtcactagtgtctctagt
gacagcctcgtcattcaagacttcattagtgaaaagttaccaaactttttgatgaatgta
tatgcgtttgtcggaagctacatagtgggttttgtcttattgtggagactcacaatagta
ggcttcccatttatcgtcctccttttgatccctggactgatgtatggacgagctctcata
aacatctcgaggaagatacgtgaagagtacaatgtggctggttctatagctgagcaggcc
attgcgtcggttcggaccgtctacgcatttagtagtgaaaagaagatgatagaaaatttc
tcaaatgcacttcaagggtcggtgaagctagggttgagacaagggctagctaaaggaatt
gccattgggagcaatggtatcacttatgctatttgggggttcatgacttggtacggaagt
cgcctggttatgaaacatggttcgaaaggtggtactgtctccacggtcattgtttgtgtc
acttttggcggcacatcacttggtcaaagtttgtcgaatctcaaatatttctcggaggcg
tttgtagcagcggaaagaatgatcaaattgataaaaagagttcccgatatagactcaaac
aacttggaaggtcaaattttggagaaaactcgaggagaagtcgaattcaaccacgtgaag
ttcacctacccgtctagacccttaaccacaatctttgatgacttttgtctaagagttcca
tccgggaaaactgtcgctctggtaggcggaagcggatcgggaaaatcaactgtgatatca
cttttacaaaggttctatgacccgatagccggagagattctcattgatggtatgcccatt
cataagttgcaagtgaagtggttgagatcacaaatgggtctagttagccaagaaccagtg
cttttcgccacatcgataaccgagaacatattatttggtaaagaggatgcatccatggat
gaggtagtagaagctgcaaaagcttcaaatgctcataatttcatatctcagttccctaac
agttacaaaactcaggttggggaaagaggagtacaattatctggaggccagaagcagagg
attgcaattgcacgagcaataattaagtcaccaataattctccttctagacgaggcaaca
agcgcattggactcagaatccgaaagagtagtccaagaagccttagaaaacgcctcggtt
ggccgtacaactatcgtgattgcgcaccgcctctctaccattcgtaatgctgatattatt
tgtgtagtccaaaatggtcgcattacagaaactggatcacatgacgagctcttggagaaa
ttagatggtcattacacttctctaatccatctacaacaaatggagaataaagaatcagat
attaacatcaatgtaagtgtgaaagagggccaacaaaggagtttgggtaaagacctcaag
tacagtccaaatgaatatattcatagcactactagttcaaacattgttacagatttttct
gatatgactcctaaagataacaagtcacgtgtgccatcatttaagagattgatggcaatg
aatagaccagagtggaaacatgcattatatggttgtgtaggtgcagccctttttggagct
gtaataccaatttacgcattctctacaggagcaatggtaacagtgttttttctaacaagt
catgaggagatgaaggagaaaacaaggatctatgtgttagtatttgttggtctagctttg
tgcactttcttgactaatatcagtcagcattataatttcgcttacatgggcgaatactta
acaaaacgtatccgagagcatatgctcgggaagatactaacgtttgaagtcaattggttc
gacgaggatgagaactcgagtggtgcggtttgctctagactagcaaatgatgctaatgtg
gtgaggtcgctagttggtgataggatgtcactgttggtacaaactatatcggcagtgagt
atcacttgtacaattggtttggtcatctcttggcgattcgccattgtgatgatttcggtg
caaccacttgttgttgtgtgcttctacactcgaaatatcctgcttaagcgcatgtcgaaa
atcgccatcaatgctcaagatgaaagcactaaactagcttcagaggctgtctccaatatt
cgaaccatcacagctttctcttcacaagaacggatcattgaattatttaaaagggctcaa
gaaggtccacggagagaaagcgcacgccaatcatggttagcagggattatgttggggact
tcacaaggccttataacgtgtgtctcagctttgaacttctggtatggtgggaaactagtt
gctgatgggaagatggtgtcaaaagaattcttagaaatatttatgattttttcgagtact
ggtcggcttattgccgaagctgggaccatgaccaaagatttagccaagggatcagatgcg
gttgcgtcagtgtttgcagtattagatcgatgcacaaccattgaaccggagaacctagat
ggatacgtcccaaaaaagataaagggacaaataagatttctcaacgtggacttctcttac
ccgacacggcctgatgtgactatattcaagaacttctccattgatattgatgcgggtaag
tcaacagcgatcgttggtccaagcgggtcaggtaaatctacaattattagcttgatcgag
cggttctatgacccgttgaagggtattgttaaaattgatggtcatgatataaggtcatat
catttgagatcacttcgtcgacacatagctttggttagtcaagaaccaacattattttcc
gggacaatccgagagaacatcatgtacggtggagcatataacaagataaacgaatcagag
attatcgaggcggcaaaggcagccaatgctcatgattttatcatatcactatctggtggc
tatgacacgtactgcggagacaagggagtgcaattgtctggtggtcaaaaacagagaatc
gcgatcgctcgagcagtcctaaagaacccatcagtgttgctccttgacgaagctacgagc
gctttggacagccaatccgaacgtgtggtgcaagatgcacttgagcgtttgatggttggg
aggacaagtgttgtgatagcacataggcttagcacaattcagaactgtgacatgatcact
gttttagacaaaggggaagttgtcgaatgtggaacacactcctctttgttggccaaaggt
cccatgggagcttatttctcattagttagtctccaaagaactctaggttga
DBGET
integrated database retrieval system
