Capsella rubella (pink shepherd's-purse): 17886713
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Entry
17886713 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17886713 isoform X2
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
crb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
17886713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17886713
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
17886713
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PGAP1
Abhydrolase_6
Abhydrolase_1
Hydrolase_4
Palm_thioest
PGAP1_3rd
DUF676
Ser_hydrolase
Motif
Other DBs
NCBI-GeneID:
17886713
NCBI-ProteinID:
XP_006292983
UniProt:
R0FTQ9
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MRDVRFAMSSQGVRPRLRIVGVVILAAWIGLTALFGLLKPIKNGCTMTYMYPTYIPISVT
DDATPGRYGLYLYHEGWRKIDFKEHLKKLSGVPVLFIPGNAGSYKQVRSVAAESDRAYQG
GPFERTFYQEASLFRGGGADTESVDYDLPSQYSNRLDWFAVDLEGEHSAMDGRILEEHTE
YVVYAIHRILDQYKESHDTREKEGAAASSNLPHNVILVGHSMGGFVARAAAVHPRLRKSA
VQTILTLSSPHQSPPLALQPSLGHYFSQVNQEWKKGYEVQTSPGGIFVSDPLLSGVVVVS
VAGGYNDYQVRSKIESLDGIVPSSHGFMISSTSMKNVWLSMEHQAILWCNQLVVQVSHTL
LSLVDSETNQPFSDTEKRLWVLTRMLQSALAQSFNGMKPMKVSHELAMVASKGSESQLST
CSLDWRDDALDRDLYIQTSTVTILAMDGRRRWLDIKLLGSNGNNHFIFVTNLAPCSGVRL
HLWPEKEKSNSNLPVCERVVEVTSKMVLIPAGPAPKQSEPGSQTEQAPPSAVLKLGPEDM
HGYRFLTISVAPREAVSGKPPVAVSMAVGQFFNPEEGAVEVSSQSMLLSTYWAKEIFLKE
DHPLAYNLSFATSLGLLPTTLSLKTAGCGINTFGLPDGETGDLDKDKLCKLRCFPPVALA
WDSVSGLHVFANLYSETIVIDSSPALWSSQSSEKTTVMLLVDPHCSYTASVHVSAPAMSS
RFVLLYGPQIVGFSFAVIMFALMRQANQWDNKLSVPRLLSAVEYNLEMPSPFLLLAALPL
ISSLFYSFLMAQPIPPLTSFTVVSLICYLMANAFISVLIIVSRFAFQASALFHTTVKSRC
QALERNYSLAFLHWFSIVSSSFICLKAIRFLKLNTTTVMTLVAVTLVSFVHPALGLFVLL
ASHVLCCHNSMCCIVMASRRKESVDQKNEDDRKTRHPSSREDPIPGDLSEKSFIETQADI
FNHRHGLLILHLLAALMFVPSLAAWFQRIGTGQSFPWFADSALCVGVIFHGILNSRPESS
SLRSFPFLSGHQLGPHHIYLLAAYYCFFSGLELAPYKVFYAIAALGYISLALKISQVNKN
DLRFRTKSRIHRN
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatgtaagatttgctatgagtagccaaggcgttcgaccaaggctgaggatagtt
ggcgttgtgattttagcggcatggattgggcttacagctttgtttggcttgctaaaacca
ataaaaaatggttgtactatgacttacatgtatcccacctacattcctatctctgtgacg
gacgatgcaactccaggaagatatggactctatctttaccatgaaggttggaggaagatt
gatttcaaggagcaccttaagaaacttagtggagttccagttcttttcataccaggcaat
gctggtagctacaagcaggtcaggtctgtggctgcagaatctgatagagcatatcagggg
gggccatttgagcgcacattttatcaggaagcttctctcttccgtgggggcggtgcagat
acagagtctgtagactatgatttgcctagtcaatacagtaacagactagattggtttgct
gtggatcttgaaggtgaacattctgcaatggatggtcgcatacttgaggagcacactgaa
tatgtcgtatatgccattcataggattttagatcagtataaggaatctcatgataccaga
gaaaaagagggtgctgctgcgtccagtaacttaccacataatgtaatattggttggccat
tctatgggtggttttgttgccagagctgctgcagtccatcctcgtttgcggaaatcagct
gtacaaaccattctaacactctcaagtccacaccaatcacctcctctggcattgcagcca
tccttggggcattacttttctcaagtgaatcaagaatggaaaaaaggttatgaagttcaa
acatctcctgggggaatttttgtgtcggaccctttactatccggagttgttgttgtatcc
gttgctggtgggtacaatgactatcaggttcgatcgaagatagagtcacttgatggcatt
gtcccttcaagtcatggctttatgataagtagtacaagcatgaaaaacgtttggctgtca
atggagcatcaagctattttgtggtgtaaccaattggttgttcaagtttcacatacgctt
cttagtttggtggactcggaaactaatcaaccattttctgatactgaaaagagactttgg
gttttaacccgaatgcttcaaagtgcattagctcaaagcttcaatggaatgaagcccatg
aaagtctctcacgagttagccatggtggcctcaaagggttctgaatcacaactctcaacg
tgttccctggattggagggatgatgctctcgatagggatctatacatacaaacaagtact
gttacgattttggcaatggacgggagaaggcgctggttggacataaaattgttggggtca
aatggaaataaccactttatctttgttacaaatctggcgccttgttctggagtaagactt
catctatggcctgagaaggagaaatcaaattcaaatttaccggtttgtgaaagggtcgtg
gaagttacatcaaagatggttctcatcccggcaggtccagcaccaaaacagtccgaacca
gggagtcagactgaacaggctcccccgtctgccgtgctgaagctagggcctgaagacatg
catggatacagattcttgactatctcagttgcccctcgcgaagctgtttctggtaaacct
cctgtagcagtttccatggcagtagggcagttctttaatcctgaagaaggggccgtggag
gtctcatctcaatcaatgctcttatctacttactgggcaaaggaaatatttttgaaggag
gaccatcctttagcttacaatttatcgtttgctaccagcttaggtctattgcccacaacg
ctgtccctgaaaactgctggatgtggaattaacacttttggtttaccagatggcgagaca
ggagacttggacaaagataagctctgcaaattgcgttgtttcccacctgttgctcttgcc
tgggattctgtgtctggacttcacgtttttgcaaatctctacagtgagacaatagttatt
gattcatcaccagctctttggagttctcagagttctgagaaaactaccgttatgctactg
gttgaccctcattgctcatacactgcaagtgttcatgtctctgctcctgccatgtccagc
agatttgtacttctttatggtcctcagatagttggcttctcatttgccgtcataatgttc
gctcttatgcggcaagctaatcaatgggacaacaaactatcagtgccacgattgctctct
gctgtagagtacaatttagaaatgccatctccatttctgcttctagctgctttacctctt
ataagttctttgttttactccttcctaatggctcaaccaattccccccctcacaagcttc
acagtggtctcgttgatctgttatttgatggccaatgccttcataagtgtgttaattatt
gtctccagatttgcctttcaagcgtctgcccttttccataccactgttaaatcaaggtgc
caagctttggaacgaaattattctcttgctttccttcattggttttctatagtctcttcc
agtttcatctgtttaaaggcaatccgatttctgaagcttaacacaacaactgttatgaca
ctagtcgcagttaccttggtgtcctttgttcatccagctttgggtctttttgtactcctc
gcctctcatgttctttgctgccataactccatgtgctgtatcgtgatggcatccaggaga
aaggaatcagtcgaccagaaaaatgaagatgaccgtaaaacacgacatccatcgagcaga
gaggatcccataccaggagatttgtctgaaaagtcatttattgagacacaagctgacatc
ttcaaccacaggcacggcctactaatattgcatctcctcgcagctttgatgtttgtaccc
tctcttgccgcttggttccagcggatcggaacaggacaaagcttcccttggtttgctgac
tctgctctctgcgttggtgtaatcttccacggaatactgaactcaagaccagagtcaagc
agcctccgctctttcccatttctctcgggacatcaacttggtccccatcacatctatctt
ctcgccgcctactactgcttcttctctgggctagagttggctccatacaaagtgttttat
gcgatagctgctttaggctatatctctttggctcttaagatctcacaggtgaacaagaac
gaccttcgtttccgcaccaaaagcagaatacacagaaactga
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