Capsella rubella (pink shepherd's-purse): 17886739
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Entry
17886739 CDS
T02984
Name
(RefSeq) nuclear pore complex protein NUP93B
KO
K14309
nuclear pore complex protein Nup93
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
17886739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17886739
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
17886739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
17886739
NCBI-ProteinID:
XP_006292672
UniProt:
R0HK36
LinkDB
All DBs
Position
Unknown
AA seq
863 aa
AA seq
DB search
MANDQEMSGWTDLLHSSTKLLEQATPSSQFPPLQRNLDQLEALSRKLKAKTLGNEAPAQS
NAATRLLAREGINADQLSRDLKSFELKTTFEDVFPAEATSVEEYLQQIHEMAMVSAIQEA
QKDNARSFNNYMLKVLEEDCRKEKRNFLHSLSKISILPKTKIIDSSRGTHAGSLVALSPQ
VSSKPGRELVSMTNKPVHEKKAYVYAEVVKKLNSARERGLPFEPATSFNGAYESLGIDST
RGKSVNMQKIWQLIQAMTGEDSALQHSVSKKMALVIGARRHLECGHGKHIMDTIQSHPTQ
AALGGSVGNLQRIRAFLRIRLRDYGLLDFDSGDARRQPPFDTTWQQIYFCLRTGYYEEAR
EIAQSSRSSQQHFAPLLTEWITTGGTVAAHTAAIASEECERLLRMGPMSDRLGQTTFDKK
KLLLYTIISGSRRQIDRILRDFSTLFNTIEDFLWFKLSCIRDVAGGSSSVVLNDGLAPYS
LDDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPVIMHMSKEAGDEGYNIDAVHIA
ISLLDHSVLSEGSGTGHKLSVMDANAEASSMIRQYGSMYLHHDDLQMTLEYYAQAAIAVG
GGRQAWSGRSNVDQQRQRNLMLKQLLTEILLREGGICFLLGARGSGEDGELGRFLPDTKL
RQQFLIEAARQCQEAGLYDKTIEIQKRVGAYSSALETINKCLSEAICSLARGRPDGESQA
AGLVVSGNDILNTYKYHSEVSVQERDRVMEQETILRELEAILSIHKLARLGNHLNAIREV
AKLPFLHLDPRLPDTTPNEFQRASSYFQNCVPDLLKVALTCLDNVADSDGSIRGMRSKIA
GFLASNTQRNWPRDLYEKIARSF
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgaccaggagatgagtggatggactgatcttctccattcttcgactaagctc
ttggaacaagcgactccttcttctcagtttcctcctcttcagaggaatctggatcaattg
gaagcgttgtcgaggaaactaaaggctaaaaccctaggaaacgaagctcctgcacagtct
aatgctgccactagactacttgcacgggagggaatcaatgcagatcaactatctcgtgat
cttaagtcatttgagttaaagacgacatttgaggatgtattccctgccgaggcaacaagt
gttgaagaatacttgcaacagattcatgaaatggcaatggtatcggctatacaggaggct
caaaaagataatgctagaagctttaataactacatgttgaaagtgttggaggaggactgt
agaaaagaaaaacgtaacttccttcatagccttagcaaaatttcaatcctacctaagaca
aagattattgattcaagcagaggcactcatgctggttcactagtggctttgagtcctcaa
gtatcttcaaaacctggaagggaactcgtgtctatgactaacaaacctgttcatgagaaa
aaggcatatgtctatgccgaggtcgtcaagaaacttaactctgcaagagaacgaggcttg
ccatttgaacctgcaacatctttcaatggtgcatatgaaagtctaggaattgattcgact
cgtggaaaatcagtcaacatgcagaaaatatggcaactcatccaggcaatgacaggtgaa
gattcagcattacaacatagtgtttccaagaagatggccctcgtgataggtgcaagacgc
catttagaatgtgggcatgggaaacatataatggatacaattcaaagtcatcctacacaa
gctgctcttggtggatcagttggaaatttgcaaagaattcgtgcttttcttcggattcgt
ctgagagattatgggcttttagattttgattcaggtgatgctcgtaggcagcctccattt
gacactacttggcagcagatatatttttgtttgagaactggttattatgaggaagctaga
gaaattgctcaatcatcccggtcatctcaacaacactttgctcccttgcttacagagtgg
attaccacaggtggtactgtggctgcacatactgccgctattgcttctgaagaatgtgag
agattgttgaggatgggaccaatgagtgatcggttgggccaaacaacatttgacaagaag
aagctcctactctacactataatatctggttcccgaaggcaaattgatcgaatcttgagg
gatttttctacgctctttaacacaatagaagattttctctggttcaaactatcatgcata
cgtgacgtagctggtggatcttcatctgtggtcttgaatgatgggctagcgccttacagt
ttggatgatcttcaggcttatctgaataaatttgagccatcttattacactaagaatggc
aaagaccctctggtatacccatacgttttgcttcttagcattcagttactaccagtgatc
atgcacatgtccaaagaagcaggagatgaagggtataatattgatgctgtccatatagct
atttcgctattggaccattccgttctatctgaaggatctgggactgggcacaaacttagt
gtgatggatgctaatgccgaggcatctagcatgattaggcaatatgggtcgatgtatttg
catcacgatgatctgcaaatgacgctggaatactatgcacaagctgctattgcagtaggt
ggggggcgacaagcttggtctggaaggagtaacgttgatcaacaaaggcaaaggaacttg
atgctgaagcagctactgactgagattttgttacgagagggtggtatttgctttctgctt
ggtgctagaggttccggtgaagatggcgagcttggaagatttctgcctgatactaaattg
aggcagcagttcttgatagaagctgcgcgtcaatgtcaagaagctggattatatgataaa
acgatagaaatacagaagagagttggtgcgtactcctctgccttagaaacgataaacaag
tgtctatctgaagccatttgctcccttgcccgcggaaggccagatggtgaaagccaagca
gcggggcttgttgtctcaggcaatgatattctcaatacttacaaatatcactctgaagtc
agtgtccaggaaagagatcgagtcatggaacaagaaacaatattaagagagcttgaggca
atactgtcaatccacaagttagccagactaggcaatcatctaaatgccataagagaagtc
gcaaaacttccatttcttcatctcgatccgagactccccgacaccaccccaaacgagttt
cagagagcatcctcttactttcagaactgtgtccctgatttactcaaggttgctctgacg
tgtttggataacgtagctgactctgatggatcgatcaggggtatgagatctaagattgct
ggatttcttgcaagcaacacacagcggaactggccccgagacttgtacgagaagattgct
cgaagcttttga
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