Capsella rubella (pink shepherd's-purse): 17887038
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Entry
17887038 CDS
T02984
Name
(RefSeq) ABC transporter B family member 22
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
17887038
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17887038
04147 Exosome [BR:
crb04147
]
17887038
04090 CD molecules [BR:
crb04090
]
17887038
Enzymes [BR:
crb01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
17887038
Transporters [BR:
crb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
17887038
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17887038
CD molecules [BR:
crb04090
]
Proteins
17887038
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
AAA_30
AAA_21
ABC_ATPase
RsgA_GTPase
Zeta_toxin
AAA_16
AAA_15
nSTAND1
AAA
AAA_28
DUF87
DEAD
AAA_23
Motif
Other DBs
NCBI-GeneID:
17887038
NCBI-ProteinID:
XP_006292374
UniProt:
R0FRN3
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MKCFRNIRSIFNHADGVDLVLMGLGLLGAIGDGFVTPIIFFITGLLLNDIGAVGDDSSFS
DETFMHAIIKNAVALLYVAGASWVICFVEGYCWTRTGERQASRMREKYLRAVLRQDVSYF
DLHVTSTSDVITSVSSDTLVIQDVLSEKLPNFLMNASAFVASYIVGFIMLWRLTIIGFPF
IVFLLIPGLMCGRALVSISRKIRQEYSEAGSIAEQAISLVRTVYAFGSEKKMVSKFSAAL
QGSVNLGVRQGLAKGLAIGSNGISYAIWGFMTWYGSRMVMYHGAKGGTIFAVIICITYGG
TSLGRGLSNLKDFSEAVVAGERIVKVIKRVPYIDSDNPKGQILENIKGEVQFKNVKFMYP
SRPETPIFDDLCLRIPPGKTIALVGGSGSGKSTVISLLQRFYDPVAGEILIDGVSINKLQ
VKWLRSQMGLVSQEPTLFATSIEENILFGKEDASMDEVVEAAKSSNAHDFISQFPLGYKT
QVGEKGVQMSGGQKQRIAIARAIIKSPKLLLLDEATSALDSESERVVQEALDNASIGRTT
IVIAHRLSTIRNVDVICVFHNGRIVETGSHEDLMRNLDGQYSSLVRLQIMETEESDDNIN
VSMGDGEFSILSKDVKYSPRASIQSHSNLFTTSSIDTNVRGSIPTNKKLHVPSFKRLMAM
NKPEWKHTSYGCLSAVLYGALHPIYAYASGSMVSVYFLTSHDEMKEKTRIYVLLFVCLAV
FCFLTSIIQHYSFAYMGEYLTKRIRENILSKLLTFEVSWFDEDENSSGAICSRLAKDANV
VRSIVGERVSLLVQTISAVSIACTIGLVISWKLAIVMIAIQPVVVACFYTQRIVLKSISK
KAIKAQEESSKLAAEAVSNIRTITAFSSQERILKLLKKVQEAPKRENIRQSWLAGVVLAT
SRSLMTCTSVLNYWYGGKLIANGQIMSKAFFELFILFVSTGRVIADAGVMTTDLAKGSDA
VASVFRVLDRYTKIDPENHEGFVPQKIKGQIRFSNVDFAYPTRPDVIIFKNFSIDINEGK
STAILGPSGSGKSTVIGLIERFYDPLKGSVEIDGRDIRSYHLRSLRKHIALVSQEPTLFL
GTIRENIMYGGASENIDESEIIEAAKAANAHDFITSLSNGYDTYCGDRGVQLSGGQKQRI
AIARAVLKNPSVLLLDEATSALDSQAERMVQNALERLMVGRTSVVIAHRLSTIQNCDMIT
VLDKGKVVECGTHSFLLGKGPMGTYFSMVSRQRTHC
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttttcgaaacattagatcgatatttaaccacgcggacggtgtggatttagtg
ctgatgggactaggtttacttggagctattggtgatggctttgtcactcctataatattt
ttcattacaggcttgttactgaatgacattggagccgtaggtgatgattcttcattcagt
gatgaaaccttcatgcatgccatcattaagaatgctgtagctttgctttatgtcgctggt
gcatcttgggtgatatgtttcgttgaaggatattgctggacaaggacaggagaaagacaa
gcatcaagaatgagagagaagtacttaagagcggtgttaagacaagatgtgagttacttt
gatcttcatgttacaagcacttctgatgttatcactagtgtctctagtgacacccttgtc
atccaagacgttctaagtgaaaagttaccaaattttttgatgaatgcatcggcatttgtt
gcaagctacattgttggtttcatcatgctgtggagacttacaatcattggcttcccgttc
attgtcttcctcttgattcccgggctgatgtgcgggcgagcactcgtcagcatctcaaga
aaaatacgtcaagagtatagtgaggctggttcaatcgctgagcaagctatctcgttggtg
cgaaccgtctatgcatttggtagtgagaagaaaatggtatcaaaattctcagctgcgctt
caaggctcagtgaacctaggggtgagacaaggactagctaaaggacttgccattgggagc
aatggtatcagttatgcaatatgggggttcatgacttggtatggaagtcggatggttatg
taccatggcgctaaaggcggtactatctttgcagtcatcatttgtatcacctatggtggc
acatcactcggtcgaggtttgtcgaatctcaaagatttctcagaggcggttgtagcgggg
gaaaggattgtcaaagtgattaaaagagttccctatattgattcagacaatcctaaaggt
caaattcttgagaatattaaaggagaagtccaattcaagaatgtgaagttcatgtatccg
tctagacctgagaccccaatctttgatgatttatgtctaagaattccaccaggaaaaact
attgctctggtcggtggaagtggttcaggaaaatctactgtgatatcactattacaaaga
ttctatgatccggtggctggagagattcttattgatggtgtgtccattaacaagttgcaa
gtaaaatggttgagatcacaaatgggtcttgttagccaagagccaacacttttcgccaca
tctatagaggaaaacatattatttggtaaagaggatgcatcgatggatgaagtagtcgaa
gctgcaaagtcctcaaatgctcatgatttcatatctcagtttcctcttggttacaaaact
caggttggggagaaaggagtgcaaatgtcaggaggtcagaagcaaagaattgcaattgcg
cgtgcgataatcaaatcgccaaaacttctcctactagacgaggcaacaagcgcattagac
tcagaatccgaaagagtagtccaagaagccttagacaatgcttctattggtcgtacaact
attgttattgcccaccgcctctctactattcgtaacgttgatgttatatgtgtattccac
aatggtcgcattgtagaaactggatcacacgaagacctcatgaggaacttagacggtcag
tattcttctctagttcgcttacaaataatggaaactgaagaatcagatgataacattaat
gtaagtatgggggatggtgagttctcgattttaagtaaagatgtgaagtatagtccaagg
gcttctattcaaagccattctaatttgttcacaacttcaagcattgatacaaatgttcgt
ggttcgattccaacgaataagaagctgcatgtgccatcttttaagagattgatggcgatg
aataaaccagagtggaaacatacatcatatggttgcttaagtgcagtcttatatggcgcc
ttacacccgatttacgcatatgcttcaggatcaatggtgtcagtgtattttctaacgagt
catgatgaaatgaaggagaaaacaaggatctacgtgctgctttttgtttgtctagctgtt
ttttgtttcttgactagtatcattcaacattatagttttgcttacatgggtgaatactta
acgaaacgtatccgagaaaatattctctcaaagctattgacctttgaagtaagctggttt
gatgaagacgagaactcgagtggtgcaatttgctctagactagccaaagacgcaaacgtg
gtgagatctattgttggtgaacgagtatcattgttggtacaaactatatcagcagtgagc
atagcttgcacaattggtttggtcatttcttggaaattagccattgtaatgattgcgata
cagcccgtggttgtcgcgtgcttctacactcaacgcattgtactcaaaagcatatctaaa
aaagcaattaaagcacaagaagagagtagcaaactagctgcggaagccgtctccaacatc
cgaaccatcacagctttctcgtctcaagaacggatcctaaaattactcaaaaaggttcaa
gaagcccccaagagagaaaacatccgccaatcatggttagcaggggttgtccttgcaact
tcaagaagcctcatgacgtgcacatcagttctaaattactggtacggtggtaagctaatt
gctaatggacagatcatgtcaaaagcattctttgagctgtttatactctttgtgagtact
ggtcgagttatcgcggacgctggagtcatgacaacagatttagccaaaggctcggatgcg
gttgcatcagtcttcagagtgttagatcgctacacaaaaattgacccggagaaccatgaa
ggatttgtcccacaaaagataaagggacaaatcagattttctaatgtggacttcgcgtac
ccaacacgaccagatgtgattatattcaagaacttctctattgacatcaatgagggaaag
tccactgccattttgggtccaagcgggtcaggtaagtccacagtaattggcttgatcgaa
cggttctatgacccgttaaaaggtagtgtagaaatcgatggccgagatataaggtcatat
catttgagatcacttcgtaaacatatagctttggtcagccaagagccaactttgttcctt
gggactatccgagagaacatcatgtacggaggagcatctgaaaatatcgatgagtcagag
atcatcgaggccgcgaaagcagccaacgctcacgatttcattacatcgctatcgaacggt
tatgacacatactgcggggacagaggagtacaattgtctggtggtcagaagcagaggata
gcaattgctcgtgcggttttaaagaacccatcagtgttgttacttgatgaagctacgagt
gctctagacagccaagctgagcgcatggtacaaaacgcactcgaacgtttaatggttggg
aggacaagtgttgtgatcgcacatagacttagtacaattcagaactgtgatatgataact
gttttagacaaagggaaagttgtggaatgtggaacacactctttcttgttaggaaaaggt
cccatgggaacatatttctcaatggtcagtcgccaaagaactcattgttga
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integrated database retrieval system
