Capsella rubella (pink shepherd's-purse): 17887120
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Entry
17887120 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: glycine--tRNA ligase, chloroplastic/mitochondrial 2
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17887120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17887120
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
17887120
Transfer RNA biogenesis [BR:
crb03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
17887120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-GeneID:
17887120
NCBI-ProteinID:
XP_023638013
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MAILTLSLPLIVSFLRPHASPRFFLLPRSLSHPPFLSRRRFHRTAAVSSASVHHQSYRNP
SDDDSTRAVSVPTFQQAIQRLQEYWASVGCAVMQPSNTEVGAGTMNPCTFLRVLGPEPWN
VAYVEPSIRPDDSRYGENPNRLQRHTQFQVILKPDPGNSQQLFINSLSALGIDVAAHDIR
FVEDNWESPVLGAWGLGWEIWMDGMEITQFTYFQQAGSLPLSPVSVEITYGLERIIMLLQ
EVDHFKKILYADGITYGELFLENEKEMSSYYLEHASVDRLQKHFDFFDEEARSLLALGLP
IPAYDQLLKTSHAFNILDARGFIGVTERARYFGRMRSLARQCAQLWLKTRESLGHPLGVV
SEPVPPICHREALEKVAKKVPEDPRSFIIEIGTEEMPPQDVTNASEQLRVLVLELLESQR
LVHGAVKAFGTPRRLVVLVDAMSSKQLEEEVEVRGPPASKAFDDEGKPTKAADGFSRRYG
VPLEKLYRKVSGKTEYVHALVTEPARLALEVLSEDLPAILAKISFPKSMRWNSSVMFSRP
IRWVMALHGDLVVPFSFAGITSGNVSCGLRNTASASLLVQNAESYEDTMRNSGINIEIEE
RKKIILEKSNALAKSVMXCLVIPHNLLNEVANLVEAPVPLIGKFKESFLELPEELLTIVM
QKHQKYFSIIDENGRLLPYFIAVANGAINEDVVRKGNEAVLRARYEDAKFFYEVDTRKRF
SEFRGQLQGILFHEKLGTMLDKMNRLQNMVTKLCLSLEIDEDVLPVVEDAASLAMSDLAT
AVVTEFTALAGIMARHYALRDGYSEQIAEALLEITLPKFSGDVIPKTDAGMVLAIADRLD
SLVGLFAAGCQPSSTNDPFGLRRISYGLVQILVEKDKDINFKHALELAASVQPTKVEANT
LEDVYQFVTRRLEQLLVDNGVGPEVVRSVLAERGNNPCLAARTAYKMEKLSRGELFPKIV
EAYSRPTRIVRGKDIGVGVEVDENAFETTQERALWSTYTSIKDQIHTDIEIEEFTEISMQ
LVEPLEDFFNNVFVMVEDERVRKNRLALLNNIASLPTGVIDLSFLPGF
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atggccatcctcactctttctcttcctcttatcgtctctttccttcgccctcacgcttct
cctcgcttcttcctcctccctcgctccctttctcatccccctttcctctcccgccgccga
tttcaccgcactgccgccgtttcctccgcctctgttcatcaccagtcctatcgtaatccc
agcgatgatgattccacccgcgcggtctctgttcctacattccaacaggcgattcagcgc
ctccaggaatattgggcttccgtcggatgcgccgttatgcaacctagcaacactgaggtc
ggagctggcaccatgaatccttgtacctttttgagggttcttggtcctgaaccttggaat
gttgcctatgttgagccaagcatacgtcctgacgattctcgctatggagagaaccccaat
aggcttcaaagacacactcaatttcaggtcattttgaaacctgaccctggaaactctcaa
cagctctttatcaacagtctctctgctttaggtattgatgtggctgcacacgatatacgg
tttgtagaagacaactgggagagcccggtgcttggtgcttggggtctgggctgggagatt
tggatggatggtatggaaatcacacaatttacttacttccagcaggctggaagtcttccg
ttgtctccagtatctgttgaaataacttatgggcttgagcgcatcatcatgttgcttcaa
gaagttgatcatttcaaaaagatcttatatgctgatggtatcacctatggggagcttttc
ttggaaaacgaaaaggaaatgagctcatattatttagagcatgctagcgtggatcgcctt
caaaagcatttcgacttttttgacgaagaagcacgttccttgcttgccttaggacttcca
atccctgcgtatgaccagcttctgaagacgtctcacgcttttaacattttagacgctaga
ggtttcattggcgtaactgaacgtgctcgttattttggtcgaatgcgcagcttggctcgc
caatgtgcccaactgtggttgaagacacgtgagtctcttggacatcctcttggtgttgtc
tctgaaccagttcctcctatttgtcacagagaggctttggaaaaagtggctaaaaaggta
cctgaggatccaagatcgtttattattgagatagggactgaagagatgccacctcaagat
gttaccaacgctagtgaacaactccgggtcttagtactagaattactagagagtcaacga
ttggtgcatggtgctgtgaaagcctttggcacaccccgcaggctagtggttttagttgat
gctatgtcctctaagcagctggaagaagaggttgaagttcgaggaccccctgcttccaaa
gcttttgatgatgaaggaaagcctacgaaggctgcagatggttttagccgtagatatggc
gttccattggaaaagttgtacagaaaagtttctggaaagacagaatatgtccatgcacta
gttacagagccagctcgacttgctttggaggttctgtcagaagatttacctgctatactg
gctaaaatatcgttcccaaagtcgatgcgctggaactcttcagtaatgtttagcagacca
attcgctgggttatggccttacatggggatctggttgtgccgttctcctttgctggcatc
actagtggaaatgtatcttgtggacttcgcaatactgcttcagcatccctattggtacag
aatgcagaatcctatgaagatactatgaggaattctggaatcaatatcgagattgaggaa
aggaagaaaatcattcttgagaagtcaaatgcactagcaaagagtgtaatgnngtgcctt
gttatcccacataatttacttaatgaggttgcaaatctcgtcgaagctcctgtgccctta
attggaaagttcaaggaatcattcttagaactcccagaggagctattaactattgtaatg
caaaagcaccagaaatatttttccattatcgatgagaatggacggctattgccttacttt
attgctgttgccaatggtgcaataaatgaggatgtagtgaggaaaggaaatgaagcagtt
ctcagggcacgctatgaagatgcgaagttcttttatgaggtggacacaaggaaaaggttt
tctgaattccgaggtcagctacagggaattctattccacgaaaagctggggacgatgcta
gataagatgaaccgtctacaaaacatggtaactaagctttgtttgtccctcgaaatcgat
gaggatgtgcttccggttgtggaggatgctgcctcacttgctatgtcggaccttgcaact
gctgtagttacagaatttactgcgctggcaggaataatggctcgtcattatgctctcaga
gatggctattcagagcagatagcagaagctttgctggaaatcacacttcctaaattttct
ggagatgtcatcccaaaaacagatgcaggaatggttttggcaatagctgatagattagat
agccttgttggtctatttgctgctggttgccagccaagttcaacaaatgacccatttggc
cttagaagaatatcatatggcttagttcagattttggtcgagaaggataaagatatcaac
ttcaaacatgccctagaacttgcggccagtgtacaacctacaaaggtcgaggcaaacact
ttagaagatgtgtatcaatttgttactcgaagactggaacagctactggttgacaatgga
gtaggccctgaagtagttaggtctgtcctagcagagcgtggaaacaatccttgtctggca
gcacggactgcatacaagatggaaaagctaagcagaggtgagttatttccgaagatagtg
gaagcatattctcgtcccacacgcattgtccgcgggaaagacattggtgttggagttgag
gtggatgagaatgcatttgagactacccaagagagagcattgtggagcacttacacctct
atcaaagatcaaattcacactgacatagaaatcgaggagttcactgagatatcgatgcaa
ttggtggagccactcgaggatttcttcaacaatgtgtttgtgatggtggaagacgaaaga
gtgaggaagaacagactcgctctgctcaataacattgccagtcttcccacaggagtcatt
gacctctcatttttgcccggattttga
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