KEGG   Capsella rubella (pink shepherd's-purse): 17887202
Entry
17887202          CDS       T02984                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5C
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
crb  Capsella rubella (pink shepherd's-purse)
Pathway
crb03020  RNA polymerase
crb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:crb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    17887202
  09124 Replication and repair
   03420 Nucleotide excision repair
    17887202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:crb03021]
    17887202
   03400 DNA repair and recombination proteins [BR:crb03400]
    17887202
Transcription machinery [BR:crb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     17887202
  RNA polymerase III system
   RNA polymerase III
     17887202
  RNA polymerase I system
   RNA polymerase I
     17887202
DNA repair and recombination proteins [BR:crb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      17887202
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N DUF2551
Other DBs
NCBI-GeneID: 17887202
NCBI-ProteinID: XP_006292191
UniProt: R0H733
LinkDB
Position
Unknown
AA seq 233 aa
MEVKMAEEGCRENGESTFNDGTYCISKTVDDGGVDSKRFYLARTTAFEMLRDRGYEVNEA
ELSLSLSEFRSVFGEKPDLERLRICVSLRSDPRKKILVVFMGSEPITVKTVRAIHSQISN
NVGVSAMILILQSKMNHFAQKELATFPFTVEIFPIGDLLVNMTKHIQQPKIEILTKEEKE
QLLRKHALEDKQLPYLQESDRFVRYYGLKKKQVVKITYSNEPVGSFVTYRCII
NT seq 702 nt   +upstreamnt  +downstreamnt
atggaggtgaaaatggccgaagaagggtgccgtgaaaatggtgagtcgacgtttaacgac
ggtacctactgcatttcaaagactgtggacgacggaggagtcgacagcaagaggttttac
ttggctcgcacgacagcttttgagatgcttcgtgacagaggctatgaagttaatgaagct
gagctgtctctctctctttctgagtttcgttctgtttttggtgagaagccagaccttgaa
cgcctccgtatctgcgtttctcttcgctcagatcccaggaaaaagatccttgttgtgttc
atgggatctgaaccaatcaccgttaaaacagttcgtgctattcatagtcagatttcgaac
aatgttggcgtgagtgctatgattctgattttgcagagcaaaatgaaccactttgcccag
aaggaattggcaactttccctttcacagttgaaattttcccgataggagatttgttggtg
aacatgacaaaacacattcagcagccaaagattgagattttaaccaaagaggagaaagaa
caattgctgaggaagcatgcacttgaggacaaacagcttccttatttgcaggagagtgac
cgcttcgtcagatactatgggttaaagaaaaaacaggtggtgaagattacatacagtaat
gaacctgttgggtcttttgtcacataccgatgcatcatctga

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