Capsella rubella (pink shepherd's-purse): 17887266
Help
Entry
17887266 CDS
T02984
Name
(RefSeq) serine/threonine-protein kinase ATG1b isoform X2
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17887266
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crb01001
]
17887266
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17887266
03029 Mitochondrial biogenesis [BR:
crb03029
]
17887266
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
17887266
Protein kinases [BR:
crb01001
]
Serine/threonine kinases: Other
ULK family [OT]
17887266
Membrane trafficking [BR:
crb04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
17887266
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
17887266
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
MIT_ATG1
Pkinase_fungal
YrbL-PhoP_reg
Kdo
APH
Motif
Other DBs
NCBI-GeneID:
17887266
NCBI-ProteinID:
XP_006292449
UniProt:
R0FRT8
LinkDB
All DBs
Position
Unknown
AA seq
707 aa
AA seq
DB search
MAQSAAAGRSGRVIGDYAVGRQIGSGSFSVVWEGRHLVHGTVVAIKEIAMARLNKKLQES
LMSEIIILRKINHPNIIRFIDMIEAPGKINLVLEYCKGGDLSMYIHKHGTVPEATAKHFM
QQLAAGLQVLRDNNIIHRDLKPQNLLLSTVDNDAALKIADFGFARSLQPRGLAETLCGSP
LYMAPEIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNSQIQLLQNIIRSTDLHFPADC
RDLSTDCKDLCQKLLRRNPVERLTFEEFFHHPFLSDKQSYDFTRSRLDSQTMNDFHSSGS
SPSRNMEEISQEDCLPFFLDDDSSGPEGSPSSFKHTSPIKSSYGFSIERREAASSPLKNM
ELTSRYSRVSHRAETNNFKFEGHRLSDRSQFKPSSLPDSRSLSTQGRGDSPDSMDQDYVL
ISGPPVDIPSSSSGSPKLFNYPFKSHSPPVESIKRNVTTLTAPMPIAGAIGNNISRFGSL
EGQNYIPGTSHGSLDLVDAFEQPSTNSLTRIRSLQKCAAAIAELVHDRGDNGKHLEAFSI
QLVILAIWNQALHICHTQAVSGTEGNLRQDINRVRRNISHEGSEKILSQIQKEFVQEVER
AEELAKFVESDNTKMPDAMEIIFQAALVLGISGGVDEVMGDAENAGNLYSKAVRLLVFLV
AEAQTLILNPPLTLTNSVRYRLRTYIDSLISRLKHLQSHRTSYPQKR
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtcggcggcggcggggagaagcggaagggttatcggcgattatgcggtgggt
cgacaaatcgggtcgggttcgttttcggttgtttgggaagggaggcaccttgtccatggc
accgtcgttgctatcaaggagatcgccatggctcggcttaataagaagttgcaagagagt
ctcatgtccgagattatcatcttaaggaagattaatcatcctaacatcatccgctttatc
gacatgatcgaggctcctgggaaaataaatctggttttggagtattgtaaagggggtgat
ctgtctatgtacattcacaaacatggaactgttcctgaagctactgctaagcattttatg
cagcagttagcggctggcttacaagttcttcgtgataataatatcattcaccgcgattta
aagcctcagaatcttcttctatccacagttgataatgatgcagctctgaagattgctgat
tttggatttgcaagatcattgcagcctaggggtttggcagaaactttatgtggttcacca
ctgtatatggccccagagattatgcagcttcaaaaatatgatgcaaaggcagatctctgg
agtgttggtgctatattatttcaacttgtgacaggcagaaccccgtttacaggaaacagt
caaattcagttgctccagaacattatcagatcaactgacttacattttccagcagactgt
agagatttgagtactgactgtaaagatctatgccagaagctcctgcgtcgtaatccagtt
gaacgtttgacgtttgaagagttttttcatcatccttttctttccgacaaacaatcatat
gatttcacaaggagtagattagattcacaaacgatgaacgattttcattcatctggaagc
agtccctcaagaaatatggaagaaatttctcaagaagactgtttgccgttctttttagat
gatgattctagtggacctgagggaagtccttcatcttttaaacatacttctccaataaag
tcatcttacggatttagtattgagagaagggaggcagcatctagtcctttgaaaaacatg
gaacttacttccagatatagtagagtcagtcatagagcagaaaccaataatttcaagttt
gaaggccatagattatcagatagaagccaattcaaaccgtcaagcttgcctgattccaga
tcacttagtactcaaggaagaggggattctccagactcaatggatcaagattatgttctg
atatctggaccaccggttgatataccatcatcttcgtctggttctccgaagcttttcaat
tacccattcaaatcacattctcctcctgtagagtccattaagagaaatgtaactacttta
acggctcctatgccaatagctggtgccattggcaacaacattagtcgatttggaagcttg
gagggtcagaactatatcccgggtacttcccatggctctctagatcttgtagatgctttt
gaacagccatcaactaacagtttgacaagaatccggtctttgcaaaagtgtgcagcagca
atagcagaattggttcatgataggggtgataatggtaagcatttagaagctttctcgatc
caactggtgattcttgcaatatggaatcaagcactgcacatctgtcatactcaggcagtc
tcggggacagaaggaaacctgcgccaagacattaacagagtaagaagaaatatcagtcac
gaaggatcagagaaaatattgtctcagattcagaaagaatttgtccaggaggttgagcgt
gctgaagaacttgccaaatttgttgaatctgataatacaaagatgccggatgctatggag
ataatatttcaagcagctcttgttcttggcataagtggaggagtagatgaagtgatggga
gacgcagagaatgcaggaaacctttactcaaaagcggtgcgtttgctagtcttcctagta
gcagaggcgcagacgctgattctcaatccgcctttaacactcacaaactcagtaaggtat
cggctcagaacatatattgactcgctcataagcagattaaaacatcttcaatcacataga
acttcatatccccagaagcgatga
DBGET
integrated database retrieval system
