Capsella rubella (pink shepherd's-purse): 17887314
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Entry
17887314 CDS
T02984
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17887314
Spliceosome [BR:
crb03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
17887314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
17887314
NCBI-ProteinID:
XP_023638495
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MAIECLVLGAGQEIGKSCVVVTINGKRIMFDCGMHMGCDDHNRYPDFSLVSKSGDYDNAI
SCIIITHFHMDHVGALPYFTEVCGYNGPIYMSYPTKALSPLMLEDYRRVMVDRRGEEELF
TTTHIANCMKKVIAIDLKQTIQVDEDLQIRAYYAGHVLGAVMVYAKVGDAAIVYTGDYNM
TTDRHLGAAKIDRLQLDLLISESTYATTIRGSKYPREREFLQAVHKCVAGGGKALIPSFA
LGRAQELCMLLDDYWERMNIKVPIYFSSGLTIQANMYYKMLISWTSQNVKEKHNTHNPFD
FKNVKDFDRSLIHAPGPCVLFATPGMLCAGFSLEVFKHWAPSPLNLVALPGYSVAGTVGH
KLMAGKPTTVDLYNGTKVDVRCKIHQVAFSPHTDAKGIMDLTKFLSPKNVVLVHGEKPSM
MTLKEKITSELDIPCFVPANGETVSVASTTFVKAKASDMFLKSCSSPNFKFSNSSQLRVT
DQRTADGVLVIEKSKKAKIVHQDEVSEVLHEKNHVVCLAYCCPVKAKGESDNDVDLIKQL
STKISEIMSGAQIHEAENSLQVGSFKGAVCLKEKCMHRTEIISCSEAVFLCCNWSVADLE
LGWEIINVMKLNL
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgaatgtctcgtgcttggtgctgggcaagagatagggaagagctgcgtggtg
gtgacgattaatggtaaaaggataatgtttgattgtgggatgcatatgggctgcgatgat
cacaatcgatacccagatttttctctcgtctccaaatccggtgattatgataacgcgatc
tcttgtatcatcatcactcacttccatatggatcatgttggagcgcttccttacttcacg
gaggtttgtggatacaatgggccaatttatatgtcgtaccccacgaaggcgttgtctcct
ttaatgcttgaggattaccgaagagtgatggtggatagaagaggcgaggaggagctattc
accaccacccatatcgcaaactgcatgaaaaaagtaattgcgatagatttgaagcaaaca
attcaggttgatgaagatcttcaaatccgtgcctattatgcaggacatgtccttggagca
gtgatggtttatgcgaaggtgggagatgcagcaattgtgtacactggagattacaatatg
acaacagatagacatctaggagcagctaaaattgacagactccagttggatcttctcata
tcagagtccacatatgcaactaccattcgcggctcaaaatatccccgggagagagagttt
cttcaagctgttcataagtgtgttgctggcggagggaaggcgctcattccttcatttgct
cttggaagggctcaggaactctgcatgctgcttgatgattactgggagcgtatgaatata
aaggttccaatttatttctcatcaggtttgaccatccaagcaaatatgtattacaaaatg
ctcatcagctggacaagccagaacgttaaagaaaagcacaatacacacaacccttttgat
tttaagaatgttaaagattttgatcggtctcttatacatgctcctgggccatgtgttctc
tttgccacacccggtatgctttgtgctggcttctcacttgaggtgttcaagcactgggct
ccatctccgttgaatcttgttgccttgcccggatactctgtggctgggaccgttgggcac
aaactgatggctggtaaacccacgacagttgatctctacaatggcaccaaggtcgatgtc
cgttgcaagatacatcaagtggctttcagtcctcacacagatgcaaaaggaataatggat
ctcacgaagttcctctccccaaagaacgttgtactcgtgcatggcgaaaaacccagcatg
atgactctaaaggaaaagataacctcagagcttgacatcccctgttttgtccctgccaat
ggtgaaacagtttcagtagcttcaaccacttttgtaaaagcaaaagcttctgatatgttc
cttaaaagctgctccagcccgaatttcaaattctcaaactcgagtcagctccgtgttaca
gatcagagaaccgcagacggggttttggtaatagagaagagcaaaaaggcgaagattgtt
caccaagatgaagtctctgaggtgttacatgagaaaaaccatgtggtctgtttagcttat
tgttgtcctgtgaaagctaagggagagtcagataatgatgttgatctgatcaaacaattg
tctacaaagatatcggagataatgtctggtgctcagatccatgaagctgaaaacagtttg
caggttggatctttcaagggggctgtgtgtctgaaagagaagtgtatgcatcgaacagag
attatcagttgtagtgaagctgtgttcttgtgttgcaactggtctgttgcagatttagag
cttggttgggaaatcatcaatgtaatgaaactaaacctttga
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