Capsella rubella (pink shepherd's-purse): 17887382
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Entry
17887382 CDS
T02984
Name
(RefSeq) protein RDM16
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17887382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17887382
Spliceosome [BR:
crb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
17887382
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Motif
Pfam:
PRP3
Prp3_C
Lyase_8_N
Motif
Other DBs
NCBI-GeneID:
17887382
NCBI-ProteinID:
XP_006292918
UniProt:
R0FTK7
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All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MTRFEDVAAQVTESSVSIAVETCSSITSEAVKRAQEQAAPMGFAPTETAVAHKPTKAHVH
VLRLDALGREIDEHGHVVSVTKPSSIITLKVNINKQKKDAFRILKPQLEVDPQENLHHYD
QRIGIEKNKILRPKRMSFKVKQGHPKKAKDDDMNPDLTESSESVARKEKLKEQIPDVEWW
DAEILTNDTITDLLSDPNILINDTINESHLKIKKIIGNVEHQFPLEPLAESASPPPQLLK
LTKKEQKKLRRLRRVAKEKEKQKMIRLGLLEPPKPKVKLSNLMKVLASEATQDPTKLEKE
IRTAAAEREQAHRDRNTARKLTPAEKREKKKRKLYGDPTTVETIVSVYKINKKLSHPETR
FKVEMNARQNILTGCSVMTDGFSVVVVEGNSKSIKTYKKLMLKRINWEKTEKKEEEEEEE
NGGNKCRLIWQGSVEKPSFHKFNVQECSFESAAKKVFTDAGVPHYWSLALNYSDD
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggtttgaagatgtggccgcacaagtcactgagagttctgtttctatcgcggtg
gaaacttgtagtagtataacctccgaagctgttaagcgagctcaggagcaggcagctcct
atgggatttgctcccacagagacagctgttgcacataaaccgaccaaggcccatgttcat
gttctacgtttggatgctcttggaagagagatagatgaacacggacacgtggttagtgtg
actaaaccaagcagtattattacattgaaagttaacatcaacaaacaaaagaaagatgct
tttcggattcttaaacctcaactggaagtagatccacaagagaacttgcaccattatgat
caaaggattggtattgagaaaaacaagattttgagacctaaacgtatgagtttcaaggtg
aagcaagggcatccgaaaaaggcaaaggatgatgatatgaatcccgatttgacagaatca
tctgaaagtgtcgcaagaaaagagaagctcaaggagcaaatcccagatgttgagtggtgg
gatgcagaaatcctcaccaatgacaccattactgacttattgtcggatccaaatatcctc
atcaatgacaccattaatgaaagccatctcaagataaaaaaaattattggtaacgtagag
catcaattccccctagagccacttgcagaatcagcgtctccaccaccccagctgcttaaa
ctgacaaagaaggaacagaagaaactgagacgcttgaggcgtgtggcaaaagaaaaggag
aaacaaaagatgattagactaggtttgcttgaaccaccaaaaccaaaggtgaaattgagc
aacctaatgaaggttcttgcgtctgaagcaacccaagacccaaccaagcttgagaaagag
atccgcacagcagctgccgagcgtgaacaggcgcacagggataggaacactgcgaggaag
ctaactcctgcagagaaacgtgagaagaaaaaaaggaagctttatggtgatccaacaaca
gttgagacgattgtgtcagtgtacaagatcaacaagaagttgtcgcatcccgaaacaaga
ttcaaagtggagatgaatgcaagacagaacatattaacagggtgcagtgtgatgacggat
ggatttagtgttgttgtggttgaaggtaatagcaaatcaataaagacatataagaagctg
atgctgaagcgaataaactgggaaaagacagagaagaaggaagaagaagaagaagaggag
aatggtggaaacaagtgtcggttgatttggcaaggaagtgttgagaaaccgagttttcat
aagtttaatgtacaagagtgctcatttgaatctgctgcaaagaaagttttcacggatgct
ggtgttccacactactggagtctcgctctcaattactcagacgactag
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