Capsella rubella (pink shepherd's-purse): 17887427
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Entry
17887427 CDS
T02984
Name
(RefSeq) E3 ubiquitin-protein ligase UPL7 isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
17887427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17887427
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
17887427
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
HECT type E3
17887427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF5917
Motif
Other DBs
NCBI-GeneID:
17887427
NCBI-ProteinID:
XP_023637832
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDLNRKHKVSLRGASSGEISRDALLAKVSQERELRSYARRANAASLLIQRVWRSYIVRKK
AAIEIQEEWEILLSSRSDTLTKSWVSSSVLRPFLFFIRALSVQHQKINARDIHCMQTCFK
ILLESINSNDQGFNFCSLAVGTIEESKTWACQTRKMVSLCSFLLIECNYSQERIRDVIGV
SALLLRILIVLTDPKSWKVITKDNFEDAETAGKMMIQFIGSCKSGYYSAVRRYIKTLTKH
TDERLLITTSAVTLALRPFQVRQPAFVDENQLDTNLAVEEYVSLILTIPQLVCCLPSALI
RALKHRSILMPCFHTILQILKDKILTRISEMEHLENQSCTMEIPSVGWAIGNIISLATVS
ETDFMDPQESNPELFYVLYVRVIVTLSENLLSQVEKVGIRDTHLDTEATSKTGKGENSVK
ISFVELLRPVCQQWHLAKLLAVSGKEIRVIADKDASTSSKKASEALGLLDIARLYSCMLR
IFCVLNPVVGPLPVLNMISFCPGYIVSLWNSLDSVLLPKNGCTADDLSHGSVKSSWNTRS
PSEKKLKHLKNDGVNRWVNVLNKFSGKSPGPREHVECTSDQPESSQVNESTDDVWDVETL
RGGPVGISKDVSCLLHLFCATYAHLLVVLDDIQFYEKQVPFMLEKQRRIASMLNTLVYNG
LLRGTGPENRQLMDSAIRCLHLLYERDCRHPFCPSALWLSPGKTSRPPIAFAARTHEVLP
ASDVVTSPSMGSVITITPHVFPFEERVHVFREFISIDKASRKMAGEVDAPGARSIEIVVR
RGHVVEDGFRQLNSIGSRLKSSIHVSFVNESGLPEAGLDYGGLSKEFLTDITKAAFATEY
GLFSQTPTSDRLLVPSPSARHLENGVQMIEFLGRIVGKALYEGILLDYSFSHVFIQKLLG
RYSFIDELSGLDPELYRNLMYIKNYDGDLKELCLDFTVTEEFCGKMSIIELKPGGKDISV
MNENKMQYIHAMADYKLNRQIVPFSNAFYRGLTDLISPAWLKLFNAHEFNQLLSGGNHDI
DVDDLRRNTKYTGGYSDSSRTIKIFWEVMKGFEPNERCLLLKFVTSCSRAPLLGFKYLQP
TFIIHKVSCDTSLWAAIGGQDVERLPSASTCYNTLKLPTYKRASTMREKLLYAITSNAGF
ELS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggacctgaatcgcaaacacaaggtgtcccttagaggcgccagcagtggggagatatca
cgggatgctttgcttgctaaagtttcacaagagagggagctccgtagttacgcaagacgg
gccaatgctgcatcacttcttattcagagagtttggaggtcttatattgtgagaaagaag
gcagctatagagatccaagaggagtgggagattttactcagttcccggtctgatacactc
actaaaagttgggtatcaagcagtgtcttgagaccgtttctcttctttatcagagctttg
tctgtccaacatcaaaagataaatgcaagagatattcactgcatgcaaacttgctttaag
attcttttggaaagcatcaactctaatgatcaggggttcaatttttgctcactagcagtt
ggtacaattgaagaaagtaaaacatgggcctgccaaacacgaaagatggtttctctctgc
tccttcctactcatagagtgtaattattcacaggagaggataagagatgttattggtgtc
agtgcccttctattacgtatccttatcgttttaactgatcccaaaagctggaaggtcatt
acaaaggataactttgaagatgcagaaacagctggaaagatgatgattcagtttataggg
agctgtaaaagtggatattactcagctgttaggagatatatcaagacattaaccaagcat
acagatgagagactgttgattactacaagtgcagtaactttggccctacggccattccag
gtgagacagcctgcttttgttgatgagaatcaactggacacgaatttggctgttgaagaa
tacgtttctctaattttgacgattcctcaactcgtttgctgcctgccaagtgctctcata
cgtgcactgaagcacaggagtatactaatgccatgctttcacactatattgcagattttg
aaggacaaaatcttgactaggatatcagaaatggagcatttagagaatcaaagttgtacc
atggagattccttctgttggttgggctatcgggaacatcatatccctggcaaccgttagt
gaaaccgattttatggatccacaagaatcaaatccagagttgttttatgtcttgtatgtt
cgtgttattgtgactctgtccgagaacctcttgtctcaggttgaaaaggttggaattcga
gatactcatcttgatactgaggccacatcgaagactggaaaaggagaaaattcagttaag
atttcttttgtggaattgcttcggccagtttgccaacagtggcatctcgcaaaacttttg
gcagtttctgggaaagaaattcgtgttatagcagataaagatgcttcgacgagtagtaag
aaagcatcagaagcactaggattgcttgatatagcacgattatattcgtgcatgttgaga
atcttctgcgtgcttaatcctgttgtagggcctttgcctgtccttaacatgatatccttc
tgtcctggatatattgtctctttgtggaattctctagatagtgtcctactacctaaaaat
ggttgcactgctgacgacttatctcatggatctgttaaaagttcatggaatacaagaagt
ccatctgagaagaagttgaaacatcttaagaatgatggtgtcaacaggtgggtgaacgtg
ctaaacaagttttctggtaaatcaccaggaccgcgtgaacatgtggagtgtactagtgat
caaccagaatcaagccaggttaatgagtcaactgatgatgtatgggatgtagaaactctg
aggggtggtcctgtaggtatctccaaagacgtgtcatgcctgcttcatctcttttgtgca
acttatgcccatttactcgttgttcttgatgacatacagttttatgaaaagcaggtcccc
tttatgctagagaaacaacggagaattgcatcaatgcttaatacactcgtgtacaatgga
ttgttgcgaggcactggtcctgaaaatagacaactgatggattctgctatcagatgtttg
catttattgtacgaaagagattgcaggcaccctttttgtccttctgccctgtggctctca
cctggtaaaactagtagacctccaattgcatttgctgccagaactcatgaggttttacca
gccagtgatgttgttacgtctccaagcatgggttctgttataacaattactccgcatgtt
tttccatttgaggaaagggtccatgtgtttagagaatttataagcatagataaagcttca
aggaaaatggctggtgaagtggatgcacctggtgcgaggtcaatagagatagttgttcgt
cgaggtcatgtggttgaagatggatttcgacaactgaattctattggcagcaggctaaaa
tcatccattcatgtatcgtttgtgaatgagtctggccttcctgaggcaggcctagactat
ggtgggctttcaaaagagtttctgactgacataacaaaagcagcttttgctacagagtat
ggtttgttctcgcaaacccctacttcagataggttgcttgttcctagcccatctgcacga
caccttgagaacggggttcagatgattgagtttcttggaagaattgttggaaaggctcta
tacgagggaatactgctggattactctttttcacatgttttcatccagaagcttttggga
cgttatagctttattgatgaactatccgggcttgatccagaactctacaggaacctcatg
tatataaagaattatgatggtgatttgaaggaactatgtctggatttcacagtcactgaa
gagttttgtggaaaaatgagcataattgagctcaaacccggtgggaaggatatttcagtc
atgaatgagaataaaatgcaatatattcatgcaatggctgactacaaactcaaccggcag
attgtgcccttttcaaatgcattttacagaggattgactgaccttatatctcctgcttgg
ctgaaactatttaatgcccatgaatttaatcagttactctcggggggaaaccatgatatc
gatgttgatgacctgaggaggaatacaaaatacactggtggttacagtgatagcagtcga
acaatcaaaatcttctgggaggtcatgaaagggtttgaaccgaatgagcgttgcttgctc
ctcaaatttgttactagttgttcacgggcaccactccttggtttcaaatacttgcagcca
accttcatcatccataaagtctcttgtgacacttctctttgggctgcaattggaggacaa
gatgtagaaaggcttccatctgcttccacgtgctacaatactcttaagcttccaacgtat
aaacgagcaagcactatgagggaaaaactattgtatgcgattacttcaaatgcagggttt
gaactctcgtag
DBGET
integrated database retrieval system
