Capsella rubella (pink shepherd's-purse): 17887508
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Entry
17887508 CDS
T02984
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
17887508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17887508
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
17887508
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
17887508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PGA2
Med15_C
Zn_ribbon_3CxxC
Motif
Other DBs
NCBI-GeneID:
17887508
NCBI-ProteinID:
XP_006290488
UniProt:
R0FMZ6
LinkDB
All DBs
Position
Unknown
AA seq
1651 aa
AA seq
DB search
MAQAQTTEGASQVVESVRFSFMTEQDVRKHSFLKVTSPILLDNVERPVPGGLYDPVMGPL
NDKEACKSCGQLRLGCPGHCGHIELVYPIYHPLLFSLLYNFLQRTCFFCHHFMAKPNDVK
KCVSQLKLIMKGDIVSAKQLEVKSDSTSTNSEDIEVSCESGVTNDSSQECEDPDMEDQRW
TSLQFAEVTAVMKNFMKLTSKECNKCKAKNPKLEKPMFGWVRMKGMNASAVGANLIRGLK
VKKSTSSVENPDDSGIDALSEAEDSDKEKREKSTEIAKEFEKQKDTKRDLLPSEVRAILK
NLWENEHEYCSFIGDLWQSGSEKIDYSMFFLESVLVPPIKFRPPTKGGDSVMEHPQTVGL
NKVLLSNITLGNACTNKLDQSKVISRWMNLQESVNVLFDSKAASVQSQKDGSGICQLLEK
KEGLFRQKMMGKRVNHACRSVISPDPYIAVNEIGIPPCFALKLIYPERVTPWNVEKLREA
IINGPDVHPGATHYSDKLSTVKLPSSVKERTAIANKLLSSRGATTELGKTCDINFEGKVV
YRQMRDGDVVLVNRQPTLHKPSLMAHIVRVLKGEKTLRLHYANCSTYNADFDGDEMNVHF
PQDEISRAEAYNIVNANNQYARPSNGDPLRALIQDHIVSSVLLTKRDTFLDKDLFNQLLF
SSGVTDMVLSSFSGKSGKKVTISASDAELLTVMPAILKPVPLWTGKQVITTVLNLITKGH
PPFTVEKATKLPVDFFKCRSREVKPNTGDLTKKKDIDESWKQDLNEDKLLIRKNEFVCGV
IDKAQFADFGMVHTVHELYGSNAAGNLLSVFSRLFTAFLQIHGFTCGVDDLIILKDMDEE
RTKQLQECEKVGERVLRKTFGIDVDRQIDPQDMRSRIERILYEDGESALASLDRSIVNDL
NQCSSKGVMNDLLSDGLLKTPGKNCISLMTISGAKGSKVNFQQISSHLGQQDLEGKRVPR
MVSGKTLPCFHPWDWSPRAGGFISDRFLSGLRPQEYYFHCMAGREGLVDTAVKTSRSGYL
QRCLMKNLESLKVNYDCTVRDADGSIIQFQYGEDGVDVHRSSFIGKFKELTVNQDMVLQR
CSEDMLSGSSSYISDLPISLKKDAEKFVEAMPMNERIASKFVRQEELLKLVKSKYFESLA
QPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAAADIKTPIMT
CPLLKGKTKEDANDITDKLRKITVADIIKDMELSVVPYTIHKNDICSIHKLKINLYKPEH
YPKNTDITEEDWEETMKVVFLRKLEDAIEIHMKMLHRMRGIRNFVQDTSPTAGNETDNDN
SISGKQTEDDDDGEGTEVDDLGSDAQKRKKQATDEMDYEENSEDETNEPSSISGVEDPEI
DNENEDVEVSKEGTPEQQKEVKKVKNVKQQSKKKRRKYVGADEDRHIFVKGEGEKFEVHF
KFPTSEPHILLAQIAQKTAQKVYIQNSGKIERCTVANCGDPQVIYHGDDPKERREISNDE
KKASPALHASGVDFPALWEFQDKLDVRYLYSNSIHDMLNIFGVEAARETIIREINHVFKS
YGISVSIRHLNLIADYMTFSGGYRPMSRMGGIAESTSPFCRMTFETATKFIVQAATYGEK
DTLETPSARICLGLPALSGTGCFDLMQRVEL
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagctcaaaccacagagggagcatcccaggtggtcgaatctgttagattcagt
ttcatgacagagcaagatgttcggaagcatagtttcctgaaagtgacgagtcctatatta
ctcgataacgtggagagacctgtacccggtggtctctatgatcctgtaatgggtccttta
aatgataaagaagcttgtaaatcatgtggtcagctcagacttggctgtccaggacattgt
ggtcatatcgagcttgtctatcctatttaccatcctttgctgttcagtcttctttacaat
tttttgcagaggacctgtttcttctgtcatcactttatggctaaacctaatgacgttaaa
aaatgtgtttctcagctgaaacttatcatgaaaggtgatatagtttccgccaagcaattg
gaggttaaatctgacagcacttccactaactcagaggatattgaggtaagctgtgaatca
ggtgtaaccaatgattcatcccaagaatgtgaagatcctgatatggaagaccagagatgg
acatctcttcagtttgctgaagtcactgctgtcatgaagaattttatgaagttgacatca
aaggagtgtaataaatgcaaagcaaaaaatcctaaactggagaaacctatgttcggatgg
gttcgcatgaaaggtatgaatgcatccgccgttggagctaatcttattcgagggctaaag
gtaaagaagtccactagcagtgttgaaaatcctgatgatagtgggatcgatgcattatca
gaagctgaagatagtgataaagagaaaagagaaaagtctacggaaatagctaaagagttt
gaaaagcagaaagatactaaaagagaccttttgcctagtgaggtcagggcaatcttaaaa
aatctctgggaaaatgaacatgagtactgctccttcattggtgatctttggcagagtgga
tcagaaaaaattgactactctatgttctttttagagagtgttcttgtgcctcctattaaa
tttagacctccaacaaaaggaggtgatagtgttatggaacatcctcaaaccgtaggactg
aataaggtcttactatctaacataacactcgggaatgcctgtactaacaaattagatcag
tccaaggtaatttccagatggatgaatcttcaagaatcggtcaatgtcttgtttgatagc
aaagctgcgtcagttcaaagccagaaagatggctcaggaatatgccaattgctagagaaa
aaagagggtctatttcggcaaaaaatgatgggaaagagagtgaatcatgcatgcagatct
gtgatatctccagatccttatatcgctgtcaatgaaatcgggattcctccttgttttgct
ttaaaattgatttatcccgagagggtgactccttggaatgttgaaaagttaagggaggct
atcattaatggtcctgacgttcatcctggagctacccattactctgacaaattatcgaca
gtgaagttgccttcgtccgtaaaagaacgaactgcaattgcaaataaattactgtcctca
cgaggagccactacagaacttgggaaaacttgtgatatcaactttgaaggtaaagttgtc
tatcgacagatgcgagatggtgacgtcgtccttgtgaatcgtcagccaacattacataaa
cccagcttaatggcgcacattgtccgtgttctgaagggggagaaaacacttcgtctgcac
tatgcaaattgcagtacatacaatgcagattttgatggtgatgagatgaatgtgcatttt
ccacaagatgagatttcacgtgctgaggcctacaatattgttaatgctaacaaccaatat
gccaggccttcgaatggtgatccacttcgagctttaattcaggatcatattgtcagttcc
gttttgcttactaaaagggacacttttttggacaaagatctatttaatcagcttctcttc
agttccggcgtgactgacatggtactcagttctttttctggaaaatctggcaagaaagtc
actatatcagcttctgacgcagaattgttgacagtcatgccggctattttgaaaccagtg
cctctttggaccgggaagcaggtcatcaccacagtgttgaatctgataaccaaaggtcac
ccgccattcaccgtagagaaagctaccaaacttccagttgatttctttaaatgtagatca
agagaagtaaaacctaatactggagatttaaccaaaaagaaagacatcgacgagtcatgg
aaacaggatcttaatgaagataaactgctcattagaaaaaatgaatttgtctgcggtgtg
attgacaaggcgcagtttgctgactttgggatggttcatacagtgcatgagctttatggt
tcaaatgctgccggaaatctgctttccgtttttagtcgtctatttacggcctttcttcag
attcacggtttcacttgtggagttgatgatctcattattttaaaagatatggatgaagag
aggacaaagcaacttcaagaatgtgaaaaagttggtgaaagagtactcaggaaaaccttt
ggcatagatgttgatcgtcagatagatcctcaggacatgagatccagaattgaacgaatt
ctttatgaggacggggaatctgccttggcatctttggacaggagcatcgtaaatgatctc
aaccagtgttcaagcaagggtgtgatgaacgatttgctgtctgatgggttactgaaaaca
ccgggaaagaattgtatttcgctaatgacgatatctggggctaagggcagtaaggttaac
ttccagcaaatctcttcgcaccttggccagcaagatctagaaggaaaacgagttccccga
atggtttctgggaagacattaccatgtttccatccgtgggactggtcccctagggctggg
ggatttattagtgacagatttcttagtggccttcgccctcaagaatattacttccattgc
atggctggacgagaagggttagttgatactgcagtgaagacatcgcgtagtgggtatctg
caaagatgtttgatgaaaaatcttgagagtcttaaagtcaactatgattgtactgtccgg
gatgctgatggatccatcattcagttccaatatggtgaagatggtgtggatgttcatcgg
tctagcttcattggaaagttcaaagaactgacagtgaatcaagatatggtcctccaaaga
tgcagtgaagacatgctatctggatccagtagttacatcagtgatctgcctattagtctt
aagaaggatgcggagaagtttgttgaggcaatgcctatgaatgaacgtattgcttctaaa
tttgtgagacaagaagaactactgaagctggtgaagtcaaaatattttgaaagtcttgct
cagccaggggagcctgtaggtgtacttgctgcccagtctgtaggagagccatcaacgcag
atgacgttgaatactttccatcttgctggacgaggagagatgaatgtgacacttggaatt
ccacgtttgcaagagattttgatgactgctgcagcagacattaagacaccaataatgact
tgccctttgctgaagggcaaaacaaaagaggatgcaaatgatattactgataagttgagg
aagattacggtggcagatataataaaggatatggaactttcagttgtaccatatacgatt
cataaaaatgacatttgtagtattcacaagcttaagataaatctctacaagccagagcat
tatccgaagaacactgatataactgaagaagattgggaagagacgatgaaggttgtgttt
ttgaggaagttggaggacgcaatagagattcacatgaaaatgctccataggatgaggggc
ataagaaattttgtgcaagacactagtccaacagctggaaatgaaactgataatgataat
tctataagtggaaagcagactgaagatgatgatgatggtgagggtacagaggttgatgat
cttggttcagatgcacagaagcggaagaaacaggcaacagatgagatggattatgaggaa
aattctgaagatgagacgaatgaaccatcgtcaattagtggagtagaagaccctgagata
gacaatgagaatgaggacgtagaagttagcaaggaaggtactccggaacagcaaaaagag
gtgaaaaaggtaaagaatgtcaaacaacagagtaaaaaaaagagacggaaatatgttggc
gctgacgaagacagacatatcttcgtgaaaggtgaaggagagaaatttgaggttcatttc
aagtttcctacaagcgagcctcatattttacttgcccagattgctcagaaaaccgcgcag
aaggtttacatccagaattcggggaagatcgaacgatgcacagttgcgaattgtggtgat
cctcaagtgatttaccatggggacgatccaaaggagagaagagaaatctccaacgatgaa
aagaaagcctcacctgcactccacgcatcaggagttgatttccctgcgctatgggagttc
caagataaacttgatgtcaggtacttgtacagcaacagcattcatgatatgctcaacatt
tttggagttgaagcggcaagagaaactataatcagagaaataaaccatgtgttcaaatca
tacggtatttctgtaagcatcagacacttgaacctcattgctgactacatgacattttcc
ggtggataccgaccgatgagccgtatgggaggaattgcagaatcaacttcaccattctgc
agaatgacatttgaaacagccactaaattcattgtccaagcagctacttatggagaaaag
gacacactagaaactccgtctgctaggatctgtcttggcttgcccgcgctttcaggaacc
ggatgctttgatttgatgcagagagtggagctctga
DBGET
integrated database retrieval system
