Capsella rubella (pink shepherd's-purse): 17887694
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Entry
17887694 CDS
T02984
Name
(RefSeq) pectinesterase 4
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17887694
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
17887694
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Paralog
GFIT
Motif
Pfam:
Pectinesterase
PMEI
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
17887694
NCBI-ProteinID:
XP_006296394
UniProt:
R0G1K9
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MIGKVVVSVASILLIVGVVIGVVAFMNKNGDTNLSPQMKAVQGICQSTSDKASCVKTLEP
VKSEDPNKLIKAFLLATKDAITKSSNFTGKTEGNMGSSISPNNKAVLDYCKRVFMYALED
LATIIEEMGEDLNQIGSKFDQLKQWITGVYNYQTDCLDDIEEKDLRKTIEDGIVDSKILT
RNAIDIFHTVVSAMAKLNNKVDEFKNTTGETPVNKGAPPVVDESPVADPDGPARRLLEDM
DQTKIPTWVSGADRKLMARAGRGRSGGGSGSIRATFVVAKDGSGQFKTVQAAVNACPEKN
PGRCIIHIKAGVYREQVIIPKKKNNIFMFGDGARKTVITYNRSVGLSPGTTTSLSATVQV
ESEGFMAKWIGFKNTAGPLGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCV
VSGTVDFIFGKSATVIQNSLIVVRKGSKGQYNTVTADGNEIGFAVKIGIVLQNCRIVPDR
KLTPERLTVASYLGRPWKKFSTTVIVNTEMGDLIRPEGWRIWDGESFHESCKYIEYNNRG
PGAINNRRANWAKIARSAAEVNDFAVPNWLGPINWIQEANVPVTLGL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgatcggaaaagttgttgtttcggtagcctccatcctcttaatagtcggagtagtcata
ggagtcgttgccttcatgaacaaaaatggtgatactaatctgtctccgcagatgaaagcg
gttcaaggaatttgccagtcgacttccgacaaagcctcatgtgtcaaaactctcgagccg
gtcaagagtgaagacccaaacaaactgataaaggcattcctgctcgctacaaaagacgca
ataaccaaatcatctaacttcacgggtaaaaccgaaggaaacatgggctcgagcatctca
ccaaacaacaaagccgttcttgattactgcaagcgagttttcatgtacgcgcttgaggat
ctcgccaccattattgaggaaatgggtgaagatcttaaccagatcggaagcaaattcgac
cagcttaaacaatggataacaggtgtttacaattaccaaactgattgtcttgacgatatt
gaagaaaaagatttacgaaagacgattgaagatggcattgtagactccaagattctcact
agaaacgctattgacatcttccacactgtcgttagcgctatggccaagcttaacaacaag
gttgacgaattcaagaacacaacaggcgaaactcctgtaaacaaaggagcccctcctgtt
gttgatgaatctcccgttgccgacccagatggtcctgctcgtcgtcttcttgaagacatg
gaccagaccaaaatcccaacatgggtttcaggtgctgacaggaagctcatggctagggct
ggacgtggccgtagtggcggcggtagtggtagcatcagagcgacctttgtggtggctaag
gacggaagcggacaatttaagacggttcaagcagccgttaatgcttgtcctgagaaaaac
ccagggcgatgcatcatccacatcaaggcgggtgtttacagagagcaagtaatcattcct
aagaagaagaacaacatcttcatgttcggagatggtgcaagaaagaccgtcattacttac
aacagaagtgttggtctcagccctggaaccaccacatcccttagtgccacagttcaggtt
gaatcggaaggattcatggcgaaatggataggattcaagaacaccgccggtcctttggga
caccaagccgcggctatcagagttaacggagaccgtgccgtgatcttcaactgtaggttc
gacggttaccaagacaccttgtacgtgaacaacggtcgtcagttctatagaaactgtgtc
gtttcaggaacagtcgacttcatcttcggcaaatctgcaactgtgatccaaaactcactc
attgttgtccgtaaaggaagcaagggacaatacaacacggtcacagctgatggaaatgaa
attggcttcgcggtgaaaatcggtatcgtcctccaaaactgtcgcatcgttccagacaga
aaactaacaccagagagattgaccgtggcgtcatacttgggaaggccgtggaagaaattc
tcgaccaccgtgattgtcaacaccgagatgggagatttgattagaccagaaggttggagg
atttgggatggggaaagtttccacgagtcatgtaagtacattgagtacaacaaccgtgga
ccaggagctatcaataacagaagagctaactgggctaagatcgccagatctgcagctgag
gtcaatgacttcgctgttcccaactggttaggtccgattaactggattcaagaagccaat
gttcctgtcacgcttggattataa
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integrated database retrieval system
