Capsella rubella (pink shepherd's-purse): 17887862
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Entry
17887862 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17887862
Organism
crb
Capsella rubella (pink shepherd's-purse)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
MATH
FancD2
TTC3
VHS
CALCOCO1
FAD_binding_1
Motif
Other DBs
NCBI-GeneID:
17887862
NCBI-ProteinID:
XP_006293557
UniProt:
R0HMK6
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MMKQSSSEAVSSSSSSAAADQSHPSVSSSSSSSSEKPLSSSSISPAEDLQVGSSRDGSGG
AQEIVAVDRPGEYTALCRWTVEGFPRVKAKALWSKYFDVGGYDCRLLVYPRGDSQALPGY
ISIYLQIMDPRGTTSSRWDCFASYRLSIVNHVDDSLTIHKDSWHRFSSKKKSHGWCDFTL
NSSILDPKMGFLFNNDSLLITADILILNESVSFSRDNSNEGQSLYKDNSIAGPMPDVLSG
KFTWKVNNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSVVNSQEYISMCLESKETDKT
LISDRSCWCLFRMSALNQKPGCTHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFMNPE
AGFLLDDMAVFSTSFHVIKEFSSFTKNGGLVGGRNGNGNGARKSDGHMGKFTWRIENFTR
LKDLLKKRKITGLCIKSKRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRSSSDWSC
FVSHRLSVVNQRLEEKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVVFS
AEVLILKETSSTKEYVDTESANSVSQNENSMKKSSFTWKVENFLAFKEIMETRKIFSKFF
QAGGCELRIGVYESFDTICIYLESDQSAGTDVDNNFWVKYKMGILNQKNPAKSVWKESSI
CTKTWNNSVLQFMKVSDMLEADAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASDDDQDA
LTTDPDEIIDSEDSEGISGDEEDTFRDFLSRAGFHLTFGENPSQPQVTLREKLLMDAGAI
AGFLTGLRVYLDDPTKVKRLLLPTKISCNDRSKLTKSEESSPSLMNLLMGVKVLQQAIID
LLLDIMVECCQPSDEGPHSESSLLSPKTDGCVPATSSESTRENGAAEPSQHLVDERFKSD
TDATVSTSAVPSSEMNGIDMLEQALAIEPISPPNISSGQSSDASLQSKTKWPEQSEELLG
LIVNSLKTLDAAVPQGCPEPRRRPHSAQKIALVLDRAPKHLQPDLVSLVPKLVEHSEHAL
AAYALIERLQKPEAEPALREPVYNALSQLECDSEVWEHILFQSFKLLNDSNEESLVAGIH
FTFKTASQCQHLPEAVNAVRERLKSLGADVSLCVLDYLSKTVHSWPDIAEMILRDINTDD
SPCGNFSTLPCATFLIGENDTASEMAGLMDEHEFYANRQFFDVYILLEMLSISCLAEEAS
QTFERAVARGAIVAQAVPMVLEKQRVQGPILNATSGESSFKHQDPVLEGEASEQPATGGT
EFRTILNLAETLTHSRDPQVRGFVKMLYTILFKWFPDQPFRIQILRRLVDRFTSPTSSGH
DLDLDLEILAILIFQEQEVARPVLAMLKKVVEHANIDRAALWHQLRANKEELVRLKEEKK
TEIQSMTKEKSSITQKLSDSEAANTRLKSEMKAEMDRFAREKKDLVEKFRDVESQLEWIR
SERQDEIDMLSSEKKTLLDRLHEAETQLALLKTRKRDELKKVGKEKTALTEKLKITETAR
KRFEEELKRYATENVTREELRKSLEDQIRQLTQTVGQTKEEKREKEDQIARCEAYIDGME
SKLQACQQYIHTLESSLREEISRHAPLYGANLESLSMKELDTIARIHEEGLRQIHALQQR
KGHTLSHGLPQGHTLYPTTPPQLPPMAIGLPPQLIPNGSGVHSNGHINGSVRPWFSHHT
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcaaagctcatcggaggcagtgtcatcgtcttcttcatcagccgccgcggac
caatctcatccctccgtttcttcatcttcttcatcatcatcggagaagcctctctcttcg
tcttcgatttctccagcggaagaccttcaggttggatcgtcgagagatggaagcggaggt
gcgcaagagatcgtagccgtcgatcggccaggagagtacacggcgttgtgtagatggacg
gttgagggcttcccacgtgttaaagctaaggcactgtggagcaagtacttcgatgtagga
ggctacgattgtcgtctcttggtttaccctagaggtgattctcaggctcttcctggttac
atcagcatctatcttcagatcatggaccctcgtggtacaacttcgtctcgttgggattgt
ttcgctagctatcgtctttcgattgttaaccatgttgatgattctttaacaatccataag
gattcttggcatagattctctagtaagaagaaatctcacggatggtgtgatttcaccttg
aactcgagtattttggatcctaagatgggttttttgtttaacaacgattcattgcttatc
actgcggatatcttgattctaaacgagtctgtgagctttagccgtgataatagcaatgaa
gggcagtctttgtataaggataattccattgctggaccaatgccggatgtgttgagtggg
aagttcacttggaaggtaaataattttagtttgtttaaggaaatgataaagacacagaag
ataatgagccctgttttcccagctggtgagtgtaatttgaggattagtgtgtaccagagt
gtggttaattcacaagaatacatatctatgtgtttggagagtaaagagaccgataagact
ttgatttcagataggagctgttggtgtttgtttaggatgtcagctctgaaccagaagcct
gggtgcactcacatgcatagagattcttatgggaggtttgctgctgataataagagtggg
gacaatacgagcttgggatggaatgattacatgaagatgtctgactttatgaacccggaa
gcagggtttttactcgatgacatggctgtatttagcacctcatttcatgttatcaaagag
ttcagcagttttactaagaatggagggttagttgggggaaggaatgggaatgggaatgga
gctaggaagtcagatggacacatgggaaaattcacttggagaattgaaaacttcacaagg
ttaaaggatcttctgaagaagaggaagataacaggtctttgcattaaaagtaagaggttt
caaattgggaaccgggattgtcgacttattgtttatccccgagggcagtcccagccacca
tgccatctttctgtatttcttgaagtgacagattcccgaagctcaagtgattggagttgt
tttgttagccaccgactatcagttgtgaaccagagattagaagagaagtcggtgacaaag
gaatctcagaatcgttactctaaagctgcaaaggattggggttggcgtgaatttgtgaca
cttactagcttgtttgatcaagactctggatttcttgttcaagacactgttgtattctct
gctgaggttcttattttgaaagagacatcttcaacaaaagagtatgtggatacagaatca
gctaattcagtttcacagaatgaaaacagcatgaaaaaaagttcttttacttggaaagtt
gagaatttcttagccttcaaggaaataatggaaacacgaaagatatttagcaaattcttt
caggctggtggatgtgaactccggattggtgtatacgagtcctttgacaccatatgcata
tatttagagagtgatcaatcggcaggtacagatgtggacaataatttttgggttaagtac
aagatgggtattctgaaccaaaagaatccggccaaaagtgtgtggaaggagtcatctata
tgtacgaagacatggaataattctgttctacagtttatgaaggtgtctgacatgttggag
gctgatgctgggtttcttgtgcgtgacactgttgtttttgtatgtgaaatattggattgt
tgtccttggtttgagttttcagacctagaggtactggcttcagatgatgaccaagatgcc
ttaactactgatcctgatgaaattattgattctgaagatagtgagggaataagtggagat
gaggaagacacattccgagattttctttcccgagctggattccatctcacctttggggag
aatccttcacaaccacaagttactcttcgtgagaagcttctaatggatgcgggtgcgatt
gctgggtttcttacgggcttgcgtgtatatcttgacgaccctactaaagtaaaacgttta
cttcttccgactaaaatatcatgtaatgatagaagcaagctaacaaagagtgaggaatct
tcacccagcctgatgaatttgctgatgggtgttaaagttctacagcaagcaattatcgat
ttacttctagatattatggttgagtgttgccaaccttcagatgaaggccctcactctgag
tcgtctttattgtccccaaagacagatggttgcgtgcctgcaacttcatcggagtcaaca
agggaaaatggagcagcggaaccttcacaacatcttgttgatgagagattcaaatctgat
acagatgctactgtcagtacttcagctgtaccaagctcagagatgaatgggattgatatg
cttgagcaagcacttgcaatagagcctatttctcctcctaacatatcttctgggcagtct
tctgatgcttcactccaatcaaagacaaaatggcctgaacagtctgaagagctgttggga
ctgattgtgaattcacttaaaactcttgatgcggctgttccacaaggttgtccagagcct
agacgacgaccacactctgctcaaaagattgctcttgttttagacagagcgcccaaacat
ttgcagccagatttagttagtctggttcccaaattggttgagcattcagagcacgcactg
gctgcgtatgcacttattgaacggcttcagaagcctgaagctgaaccagcgttgcgtgaa
ccagtatacaatgctctttcccagttagaatgtgacagtgaagtgtgggagcacatactt
tttcagtcatttaagcttctgaacgactcaaatgaggaatctcttgtggcgggcattcat
ttcacatttaagactgcctcccaatgccaacacctacctgaagccgtaaatgcagtccgt
gaacggcttaaaagtctgggtgctgatgtgtctctttgtgtccttgactatttgagtaaa
actgtacacagttggcctgatattgccgaaatgatacttagggacatcaacactgacgac
agcccatgtggcaatttttcaacgttaccctgtgcgacttttctgattggtgaaaatgac
actgcctccgaaatggcgggtttgatggatgaacacgaattctatgcaaataggcaattt
tttgatgtctacattctgctggaaatgttgtccatatcgtgcctagctgaagaggcatct
caaacgttcgaaagagctgttgctcgtggagccattgttgcacaggctgttcccatggtt
cttgaaaaacaacgtgttcagggcccaattctgaatgctacaagtggggaatcttctttt
aagcatcaagatcctgtattggagggagaagctagtgagcaaccagccactggagggact
gagttcaggacaatcctcaatcttgctgagacattaactcattccagagatcctcaagtg
aggggatttgtgaaaatgctatacacaatattatttaaatggtttccggatcagcccttt
aggattcaaatactaaggagacttgtagatagattcaccagccctacgagtagcggccac
gatttagacttagacttggagattctagctattctgatatttcaggagcaagaggttgct
agacccgttttagccatgctgaaaaaggttgtggaacatgccaatattgacagggcagcc
ctgtggcatcaattgcgtgcaaacaaggaagagcttgtccggttaaaggaagaaaagaag
acagagattcaatctatgacaaaggagaaatctagcatcacacaaaaactaagtgactca
gaggctgcaaacacccgtcttaagtctgaaatgaaagctgagatggaccgcttcgctcgg
gaaaagaaggatctggttgaaaagtttcgggatgtggagagtcagctggaatggatccga
tcagaacgtcaagatgagatagatatgctctcgtctgagaagaaaactcttttggatcgc
cttcacgaagcagagacccaacttgctttgctaaaaacccgaaagcgtgatgaactgaag
aaggtaggaaaagaaaaaactgctctaaccgagaagctaaagataaccgagacagctcgg
aaaagatttgaagaagagttgaaacgatatgctactgagaatgtaactcgagaggaatta
cgcaagtcacttgaggatcaaatcaggcaactaacacaaacagtagggcaaacaaaagaa
gagaaacgagagaaagaagatcagattgctcggtgtgaagcttacattgatggaatggaa
tccaaactccaagcttgccagcaatacatccacacactagaatcctcacttcgagaagaa
atctcaagacatgcgccactctacggtgccaatttagagtctctatcgatgaaggaactc
gacaccatagctcgtatccatgaagaagggctaagacaaatccacgctcttcaacaacgt
aaaggacacactttatcacacggtctcccccaaggtcacacgctatacccaacaacacca
cctcagcttcctccaatggcgatcggtttaccacctcagcttattcctaatggctcaggg
gttcactcaaacggccatatcaatggttcagtcaggccttggtttagccaccacacctaa
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integrated database retrieval system