Capsella rubella (pink shepherd's-purse): 17887925
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Entry
17887925 CDS
T02984
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
17887925
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crb01002
]
17887925
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17887925
Enzymes [BR:
crb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
17887925
Peptidases and inhibitors [BR:
crb01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
17887925
Ubiquitin system [BR:
crb04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
17887925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
17887925
NCBI-ProteinID:
XP_006293436
UniProt:
R0HAA0
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MGKRLKKGQKPPSVNQPATFSKNLTKQSEQSVEITEEVAVTMTEKRSCVHFDRFVHLDEL
LKTIKSSQHIKCGECKEGVHLKGDGKESINTWKNGFYSFYPMSTKKATWVCLECGYYVCG
DVGLPTGSQSHVVQHTKLTRHRLVIQCENPQLRWCFPCQSLLPFEKEENGEKKDLLVEVV
KLIRERSSSTSSASSETENSSSGSGSITGGIQEARYGYAVRGLLNLGNTCFFNSVMQNLL
SLDQLREHFLKEDMSGGGPLVSSLKKLFAETKSEVGFFRSAINPRAFFVSVCSHAPQFRG
YQQHDSHELLRHLLDGLSIEESSLRQKLDVSDSDESFTHQKPTLIDSVFGGEISSTVSCL
ECGHSSKVFEPFLDLSLPIPSKKSPPEKQQTLSQANKVPNNDVVSKDSEVVSAKPALYNN
STVSIFESPSAMALDDKQVSDIATDSDTEEHDRFWEDYSKSETSHNETDLVLLGDVSATA
PSTEAKGVNQTLVGSTETLMHDSDGIAKPETVIDEEDARATQSTEDTYASGISSDIDKAR
VFGSPDSGKSSSSGILWDDEELPLMVSDSQILYMPYKDDISYDDNTVAEGIGGASSYVRS
HHLQTDEPGISCNNETVPAGESGGSSSFWSCDHEPKIDYVDFSSFFDEPEIPEGPVFRLP
YKTEVSEAGFVAVSSNDKTIKSCDGKGSLSFVSGDHERNIDYFDFSSFVEPEISEKPCFR
PKSKSEVSKADFMAVSSNDKTFRTGKDEAFSSFMSCDNKQNRDYVDLIDDPMISERPAFR
PLSKAEVYEVGFMAVSSDSDPVVIDDSDSPVSVDKCLAQFTKPEILSEDNAWHCENCSKN
LKLQQLREKRETEEGLSNGWVNENGASLASAFDDFIDNPLIQSAPIIELLNCKEEKSAIF
DGILGDSDAKQAPITSSVTETSILSGETISSQPANGYECENWEGKALDPEEVIVKSDATK
RVLVNKAPPVLTIHLKRFSQDARGRLSKLSGHVDFKEFINLSQYMDTRWTEEDQPVYRLA
GLVEHQGTMRGGHYVAYIRGGDKTRRESDIEEPNSSIWYHASDSWVRRVSFEEVLRSEAY
ILFYERI
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaggttaaagaagggtcaaaagcctccaagtgtgaatcagcctgcaacgttc
tccaagaatttaactaagcaatctgagcaaagcgtggagataactgaggaggttgctgtg
acaatgacggaaaaaagatcttgtgtccattttgatagatttgttcatttggatgagttg
ttgaaaacgattaaatcatctcaacacatcaagtgtggagaatgcaaggaaggagtgcac
ttgaagggagatggtaaggaaagcattaatacctggaaaaacgggttttattctttttac
ccaatgtcaactaaaaaggctacttgggtttgcttggaatgtggctattatgtttgtgga
gatgttggtttgccaactggatctcagagtcatgttgtccagcacaccaagttgacgcgt
caccgtttggtgattcagtgtgaaaatcctcagttaagatggtgtttcccatgccaatca
cttctcccttttgaaaaagaagagaatggtgagaagaaagatttgttggtggaagtcgtg
aaattgattagagaacgatcttcaagcacgtcctctgcttcaagtgaaactgaaaattca
tcttcaggaagtggtagtatcactggtggtatacaagaagcaagatatggttatgctgta
aggggtttacttaaccttggcaacacatgtttctttaactctgtaatgcaaaaccttctt
tctttggatcaattacgtgagcacttcttgaaagaagatatgtctggtggcgggcctctc
gtttcttccttgaagaaattatttgctgaaacaaaatcagaagtaggcttttttaggagt
gcgataaatccaagagcctttttcgtttctgtttgttctcatgctccccaatttagggga
tatcagcagcatgacagtcatgagttgctaaggcacttgttggacggtttgagcattgaa
gaatcaagcctgaggcaaaagcttgatgtttctgatagtgatgaaagttttacacatcag
aaacctactctcatagattctgtttttggaggtgaaatttcgagcactgtgtcttgtttg
gaatgtgggcattcctctaaagtgtttgaaccctttttggatctctctttacctattccg
tccaagaaatcacctcctgaaaagcaacaaaccctttctcaggcaaacaaggttcctaat
aatgacgtagtcagcaaagattcagaagttgtgtcagctaaacctgcattgtataacaat
tccactgtttccatcttcgagagcccttctgctatggcacttgatgataagcaggtctct
gatattgcaacagactctgatactgaagaacatgatagattttgggaggattattctaaa
tcagaaacctctcacaatgaaactgatttggttttgcttggtgatgttagtgctaccgct
ccatcaactgaggctaaaggagttaaccagactttggtaggtagcacagaaacgctgatg
catgatagtgatggaattgcaaaaccagaaactgtcattgatgaagaagatgcacgagct
acacaatctactgaagacacatatgcaagtgggatttcctcagatattgataaggctcga
gttttcggttctcctgattcagggaaaagctcttcatctggaattttgtgggatgatgaa
gagcttccattgatggtttcagattctcagattctgtacatgccttataaagatgacata
tcctatgatgataacacagttgcagaaggtataggtggggcttcgtcatatgtgaggagc
caccatttacaaactgatgagcctggcatctcctgtaataatgaaacagttccggcaggt
gagagtggaggttcctcgtcattctggagctgtgatcatgaaccaaaaatagattatgtt
gactttagcagtttttttgacgagcctgagatacccgaaggacctgttttcagactgcca
tataaaactgaagtttctgaagctggttttgtggctgtcagcagtaatgataaaacaatt
aagtcatgtgatggtaaaggttccttgtcattcgtgagtggtgaccatgaacgaaacata
gattatttcgactttagcagttttgtcgagcctgagatatctgaaaaaccttgtttccga
ccgaagtcaaagtctgaagtgtccaaagctgattttatggctgtcagcagtaacgataaa
acatttagaacaggtaaagatgaagcgttttcatcattcatgagctgtgacaataaacaa
aacagagattatgttgacttgattgacgaccctatgatatctgaaagacctgcttttaga
ccgctatctaaagctgaagtttatgaagttggttttatggctgttagcagcgactctgat
cctgtagttattgatgattcggattcaccagtgtctgtagataagtgtttggctcagttc
accaagcctgagattttgtcagaagacaatgcttggcattgcgagaattgttcgaagaac
ctaaaactccagcagttgagagaaaagagagaaactgaagaaggattgagcaatggatgg
gtgaatgaaaatggagctagtttggcatcggcttttgatgacttcatagacaatccatta
attcaatccgctccgatcatcgaattgctaaactgcaaggaagagaaaagcgccatattt
gatggaattctgggagattcagatgcaaagcaagctccaattacttcttcagttactgaa
acttctattctcagtggagaaaccatcagttctcaaccagccaatggctatgaatgtgaa
aactgggaaggcaaggcactagatcctgaggaagtgatagtaaaaagtgatgctactaaa
agggtacttgtaaacaaggcaccacctgtcttgaccatacatctcaaaaggttcagccaa
gatgctcgaggcaggctaagcaagttaagtggccatgttgacttcaaagagttcatcaat
cttagccaatatatggatactaggtggaccgaagaagaccagccggtttacaggttggcc
gggttagtggagcatcaagggacaatgagaggtggtcattatgttgcttacattagagga
ggcgacaagacgaggagagagtctgatattgaagaacctaactcatcaatatggtatcac
gcaagcgattcttgggttcgacgggtttctttcgaagaagttctccgttctgaagcgtat
atcttattttacgaacggatctaa
DBGET
integrated database retrieval system
