Capsella rubella (pink shepherd's-purse): 17888020
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Entry
17888020 CDS
T02984
Name
(RefSeq) isoamylase 1, chloroplastic
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00500
Starch and sucrose metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
17888020
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
17888020
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SSDB
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Paralog
GFIT
Motif
Pfam:
ISOA1-3_C
Alpha-amylase
CBM_48
GHL10
Motif
Other DBs
NCBI-GeneID:
17888020
NCBI-ProteinID:
XP_006295820
UniProt:
R0HXA3
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MDAIKCSSSFLHHTKLNTLFYNHSFPRISTPNFKRIFRPISISAKDRRISEAENVAVVEK
PLKSDRFLVSDGLPSPFGATVREDGVNFSVYSANSVSATICLISLSDLRQNKVTEEIQLD
PSRNRTGHVWHVFLKGNFKDMLYGYRFDGKFSPEDGHYYDSSNILLDPYAKAIISRDEFG
VLGPDENCWPQMACMVPTRDEEFDWEGDMHLKLPQKDLVIYEMHVRGFTRHESSKIEFPG
TYQGVAEKLDHLQELGINCIELMPCHEFNELEYHSYNTILGDHRVNFWGYSTIGFFSPMI
RYSSASSRSFAGRAINEFKILVKEAHKRGIEVIMDVVLNHTAEGNEKGPIFSFRGVDNSV
YYMVAPKGEFYNYSGCGNTFNCNHPVVRQFIVDCLRYWVTEMHVDGFRFDLGSIMSRSSS
LWDAANVYGADIEGDLLTTGTPITCPPVIDMISNDPILRGVKLIAEAWDAGGLYQVGMFP
HWGIWSEWNGKFRDVVRQFIKGTDGFAGAFAECLCGSPNLYQGGRKPWNSINFICAHDGF
TLGDLVTYNNKNNLANGEENNDGENHNYSWNCGEEGDFASISVKRLRKRQMRNFFVSLMV
SQGVPMIYMGDEYGHTKGGNNNTYCHDNYLNYFRWDKKEEADSDFFRFCRLLIKFRDECE
SLGLYDFPTAKRLQWHGLAPEVPDWSEISRFVAFSLVDSVKREIYVAFNTSHLATLVSLP
SRPGYRWEPFVDTSKPSPYDCMTPDLPERETAMKQYRHFLDANMYPMLSYSSIILHLSPV
DDS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaatcaaatgcagctctagtttcctccaccacaccaagctgaacactctcttc
tataaccactcttttcctagaatctccactcccaatttcaagcgcatcttccggccaata
tcgatttcggcaaaggacagaagaatcagcgaagctgaaaacgttgccgtagtggagaaa
cctcttaaatcagatagatttctcgtttccgatggtcttccttcaccattcggcgccacc
gtcagagaggacggcgtcaatttctctgtttactctgcaaactccgtttccgccaccatc
tgcttgatttctctctccgatctccgtcagaacaaagtgacggaggagattcagctcgat
ccatcaaggaatagaactgggcatgtctggcatgtgtttttgaaagggaatttcaaagat
atgttgtatggttacagatttgatggcaagttctctcctgaagatggtcactattatgac
tcttctaacattttattggatccttacgcaaaggcaattataagcagagatgagtttgga
gttttgggacctgatgaaaattgttggcctcaaatggcgtgtatggtgcccactcgtgat
gaagagtttgattgggaaggggatatgcatctgaagctgccacagaaggatcttgttata
tatgaaatgcatgtgcgaggtttcacaaggcatgaatctagcaaaattgaatttcctgga
acataccagggtgttgcagagaagcttgaccatttgcaggagcttgggataaattgcata
gaattaatgccatgtcacgagtttaatgagctggagtatcacagctacaatacgatactg
ggagaccatagggtaaatttttggggttactctactattggattcttctcacccatgatc
agatattcatcggcaagctctcgcagctttgctggaagagccataaatgagtttaaaatt
cttgttaaagaggcacataaacgaggaattgaggtaatcatggatgtcgttttgaaccac
acagctgaaggcaatgaaaaaggacccattttctcatttagaggagttgataacagtgtc
tattacatggttgctccaaagggcgaattctataactattcaggctgtggtaatacattc
aactgcaatcatcctgtggtgcgtcaattcatagtagattgcctgagatattgggtaaca
gagatgcatgttgacggcttccgctttgatcttggttcaattatgtcaaggagcagcagt
ctatgggatgcagccaatgtttatggggctgatatagaaggtgacttgctgacaactggt
acccctattacctgccctccagtaattgatatgataagtaatgatccaatactccgtggt
gttaagctgatagctgaagcatgggatgcgggtgggctataccaagttggcatgtttcca
cactggggtatttggtctgagtggaatggaaagttccgggatgttgtgagacagttcata
aaaggcaccgatggctttgccggtgcttttgctgaatgtctctgtggaagcccaaatctg
taccagggaggtaggaaaccttggaacagcatcaattttatatgtgcgcatgatggtttt
acgttgggagatttagtaacttacaacaataagaataacttggcaaatggagaagagaat
aatgatggagagaatcacaattatagctggaactgtggagaggagggagactttgcaagt
atatcggtgaagagattaaggaaaagacagatgcggaatttctttgtttccctcatggtt
tcccaaggtgtcccgatgatctacatgggagatgaatatggccatacaaaggggggaaac
aacaacacctattgccatgacaactatttgaactattttcggtgggataaaaaggaagaa
gcagactccgacttcttcagattctgccgtcttcttatcaagtttcgtgatgaatgtgaa
tcacttggcctgtacgattttccaacagcaaagcgtctgcagtggcatggtcttgctcct
gaggtgccagattggtctgaaataagtcgatttgttgcattttcactggttgattctgtg
aagagagaaatctatgtggcattcaacacgagtcatctagccactcttgtttcactccct
agccggcctggataccgatgggagccatttgtagacacgagcaaaccgagcccttatgac
tgcatgacaccggacctcccagagagagaaacagcgatgaagcagtataggcacttcttg
gatgcaaatatgtacccaatgctcagttactcttccatcattctccatctttcaccagtt
gacgacagttga
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