Capsella rubella (pink shepherd's-purse): 17888113
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Entry
17888113 CDS
T02984
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17888113
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17888113
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17888113
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
17888113
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
17888113
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
17888113
Prokaryotic type
17888113
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
17888113
NCBI-ProteinID:
XP_006294326
UniProt:
R0HCL4
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MGHATTLSQFLILSTFSRLGSRTSRFLTKPTSLSGSFSPIQVTGQGFRCCCSAAAATDDT
SPSVKKRVVSGVQPTGSIHLGNYLGAIKNWVALQDTYETLFFIVDLHAITLPYDAQQLGK
ATRDTAALYLACGIDASKASVFVQSHVSAHSELMWRLCASTPIGWLQKMIQFKEKSRKEG
GENASAALLIYPDLMAADILLYQADFVPVGEDQKQHLELAREIAQRMNNLYGGRKWKKLG
GRGGSLFKIPEPLIPQAGARVMSLTDGLSKMSKSAPSDQSRINLLDSKDLIADKIKRCKT
DSFAGLEFDNAERPECNNLLSVYQIVSGKTKEKVKEECKDLSWGTFKPLLADALIEHLSP
IQARYQEIIAEPEYLDKVLSEGADRATELGDITMRNVNQAMGFYPRR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggggcacgccacgactctctcacaatttctcatcctctctaccttctctcgtctcggg
tctcgtactagtagattcctcacaaaacccacctctctctccggctctttttctcccatt
caggtcaccggacaagggttccgatgctgttgctctgccgccgccgctacagatgacact
tctccttctgtaaagaaacgtgtggtctctggtgttcagcctacaggatcaattcactta
ggaaattatcttggcgctatcaaaaattgggtcgctcttcaggatacatatgagacactc
tttttcatcgtagaccttcacgcgataactcttccatatgatgcacaacaactaggaaag
gcaactagggatactgcagcactatatctagcatgtggtattgatgcttctaaggcttca
gtatttgtgcaatctcacgtaagcgctcattcggagttgatgtggcgtttatgtgcatca
acacctattggttggctacagaaaatgattcaattcaaagagaaatctcgcaaagagggg
ggtgagaacgctagtgccgctttgttaatttatcctgatctgatggctgcagatatccta
ctgtatcaggcggattttgtccctgttggtgaggaccagaagcaacacctagagcttgcc
cgcgaaattgcacagcgtatgaataatttatatggtggaaggaagtggaagaagctagga
gggcgtggtggctcgctctttaagataccagaaccactcataccacaagctggagcccgt
gtaatgtctcttactgatggtctttccaagatgtccaagtctgcaccttctgaccagtcc
aggatcaatctccttgactcaaaagacttgattgcagacaagataaaacggtgcaagaca
gactcatttgcaggccttgagtttgacaatgctgagagacctgaatgcaacaatctcctc
tcagtatatcagattgtttcgggcaagacgaaagagaaagtgaaggaggaatgcaaagat
ttgagctggggcacatttaaacctctccttgcagatgctttgatagaacatcttagtcca
atccaggctcgttatcaggagataatagcagaaccagagtatttggacaaagtactgtca
gaaggtgcggacagagccacggagctaggggatattacaatgcgcaatgtgaaccaagct
atgggattctacccgaggagatag
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