Capsella rubella (pink shepherd's-purse): 17888231
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Entry
17888231 CDS
T02984
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
17888231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
crb03032
]
17888231
03036 Chromosome and associated proteins [BR:
crb03036
]
17888231
03400 DNA repair and recombination proteins [BR:
crb03400
]
17888231
Enzymes [BR:
crb01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
17888231
DNA replication proteins [BR:
crb03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
17888231
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
17888231
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
17888231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARP
zf-PARP
PARP_reg
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
BRCT_3
BBS7_hp
Chordopox_RPO7
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
17888231
NCBI-ProteinID:
XP_006293618
UniProt:
R0FVD3
LinkDB
All DBs
Position
Unknown
AA seq
985 aa
AA seq
DB search
MATPHKPWRAEYAKSSRSSCKTCKSSITKENFRLGKLVQASQFDGVMPMWNHASCILKKA
KQIKSVDDVEGIESLRWEDQQKIRKYVESGAGNSTSTSTSTSTSTSSTANNAKLEYGIEV
SQTSRAGCRKCSEKILKGEVRIFSKPEGPGNKGLMWHHAKCFLEMSSSTELESLSGWKNI
PESDQEALLPLVKKALPAAKTETSEARQTNSKVGTKRRNDSGDNEKSKLAKTSFDMSTRG
ALQPCSTEREMEAQTKELWDLKDELKKYVSTAELREMLELNEQSTRGSELDLRDKCADGM
MFGPLALCPICSGHLSFSGGMYRCHGYISEWSKCSHSTLDPDRIKGKWKIPEETENQYLL
KWNKSQKSVKPKRLLRPVPSGETSQGQGSNDAVDSSRSEKLSDLKVSIAGDTKERQAWKK
RIEEAGAEFHANVKKGTSCLVVCGLTDIRVAEMSKARRMKVAIVREDYLVDSLKKQRKLP
LDKYKIEDSSESLVTVKVKGRSAVHEASGLQEHCHILEDGNSIYNTTLSMSDLSTGINSY
YILQIIQEDKGSDCYVFRKWGRVGNEKIGGNKVEEMSKSDAVHEFKRLFLEKTGNSWESW
EQKTNFQKQPGKFLPLDIDYGVNKQVAKKEPVQISSNLAPPLIELMKMLFDVETYRSAMM
EFEINMSEMPLGKLSKHNIQKGFEALTEIQKLLTESNPQPSIRESLLVDASNRFFTMIPS
IHPHIIRDDDDFKSKVKMLEALQDIEIASRLVGFDVDSTESLDDKYKKLHCEISPLAHDS
EDYRLIEKYLNTTHAPTHTEWSLELEEVFALEREGEFDKYAPYREKLGNKMLLWHGSRLT
NFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTGKENPVGLMLLSEVALG
EIHELTKAKYMDKPPRGKHSTKGLGKKVPQDSDFAKWRGDVTVPCGKPVSSKVKASELMY
NEYIVYNTAQVKLQFLLKVRFKHKR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccacataagccgtggagggcggagtatgctaagtcttcgaggtcttcatgc
aagacttgcaagtcctccattactaaggagaactttcgtcttggaaaattggttcaagcc
tctcaatttgacggcgtcatgcccatgtggaaccatgctagttgtatactgaagaaagct
aagcagataaaatcagttgatgatgttgaaggcatagagtcacttcgttgggaagatcaa
caaaagattagaaaatatgttgaatctggagcagggaatagcacgagcacaagcacaagt
acaagtacaagcacgagtagtaccgctaataatgccaaactagaatatgggattgaagtg
tcacaaacttctcgagcaggttgcagaaagtgtagcgaaaagatcttgaaaggagaggta
cgaatattctctaagcctgaaggtccgggtaacaagggtttgatgtggcatcacgcaaaa
tgtttccttgagatgtcttcctctactgaactggaaagtttgtctggatggaaaaacata
ccggagtcagaccaagaagctcttcttcccttagtgaagaaagctttgccggcagccaaa
actgagacatcagaagcacgtcaaacaaattcaaaagtaggcacaaaacgaagaaacgat
tctggtgataatgagaagtcaaagctagcaaaaactagttttgacatgtctacacgcggt
gctttacaaccttgtagcacagaaagggaaatggaggctcaaactaaggaattgtgggac
ctgaaggatgaactgaaaaaatatgtatcaactgctgagttgcgggaaatgcttgaacta
aatgaacaaagtacaagaggatcagaacttgatctgcgtgataaatgtgctgatggcatg
atgtttggtccactcgctctctgcccaatttgctctggtcatctatctttttctggagga
atgtaccgatgccatgggtacatctcggaatggagcaaatgttctcattccactttggat
ccagaccgtatcaaagggaagtggaaaatcccagaagaaacagaaaatcagtaccttctc
aagtggaataagtctcaaaagagtgtgaagccaaaacgtcttctgcgccctgtaccatct
ggtgagacgtctcagggtcaaggttctaatgatgcagttgactcctcaaggagtgaaaag
ctgtcagatcttaaagtatcaattgctggagatactaaggaacgccaagcatggaagaag
agaatcgaggaagctggtgcagagtttcatgctaatgttaaaaaaggcacaagctgtttg
gttgtctgtggactgacagatatccgagttgctgaaatgagcaaggcaaggaggatgaaa
gtggcaatcgtgagagaggattatttggttgactctctaaaaaaacagaggaaacttcca
ttggacaagtacaaaattgaagactctagtgagagcctggttactgttaaagtaaaaggg
cgaagtgctgtgcacgaagcgtctggcctccaagagcactgtcacattcttgaagatggg
aacagtatttataacacaactctgagcatgtctgatctttctaccggtatcaatagttat
tacattctccagataatccaagaagataaaggttcagattgctacgtatttcgtaaatgg
ggccgagttggaaatgaaaagattggtggtaacaaagtggaagaaatgtcaaagtctgat
gctgttcatgaattcaaacgtctatttcttgaaaagactggaaactcatgggaatcttgg
gaacaaaaaacaaatttccagaaacaacctggaaaatttctcccgttggacattgattat
ggagttaacaagcaagtagccaaaaaagagccagttcagatcagtagcaaccttgctcct
ccattaatagagttgatgaagatgctttttgatgtggaaacttacagatctgctatgatg
gagttcgagataaatatgtcagagatgccacttgggaaactcagcaaacataatatacag
aagggttttgaggcattgacggagatacagaagctattgactgaaagcaacccccagcct
tctatcagagaaagcttgcttgttgatgctagtaatagattttttaccatgatcccttcc
attcatcctcatattatccgagatgacgatgactttaagtcaaaggtgaaaatgctcgag
gctctgcaggatatcgaaatagcatcaagattagtaggctttgatgttgatagcaccgaa
tctcttgatgataaatataaaaagctgcattgtgaaatttcaccacttgctcatgatagc
gaagattatcgattaatcgagaagtatcttaacacaactcatgccccaacacatacagag
tggagtcttgaactggaggaagtttttgctcttgaaagagaaggagagtttgataaatat
gctccttacagggaaaaacttggcaataaaatgctcctatggcatggttctcgattaacg
aattttgttggcattctgaaccaaggactaagaattgcgcctccggaagctcctgctact
ggctacatgtttggaaaggggatatatttcgctgaccttgtcagtaaaagtgctcagtac
tgctacacgggtaaggaaaacccggtgggtctaatgcttctgagtgaagttgcattggga
gaaatacatgagttaacaaaagctaagtacatggataaacctccgagagggaaacactct
accaaaggtcttggcaagaaagtgccccaagattcagattttgctaagtggagaggtgat
gtgactgtaccatgtggaaaacctgtttcatcgaaggtcaaggcttctgagcttatgtac
aacgagtatatcgtctacaatacagctcaggtgaagttgcagttcttgttgaaagtaagg
tttaagcacaagagatga
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