Capsella rubella (pink shepherd's-purse): 17888237
Help
Entry
17888237 CDS
T02984
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
17888237
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
crb01007
]
17888237
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
crb03016
]
17888237
03029 Mitochondrial biogenesis [BR:
crb03029
]
17888237
Enzymes [BR:
crb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
17888237
Amino acid related enzymes [BR:
crb01007
]
Aminoacyl-tRNA synthetase
Class I (G)
17888237
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
17888237
Prokaryotic type
Other AARSs
17888237
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
17888237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
kleA_kleC
Motif
Other DBs
NCBI-GeneID:
17888237
NCBI-ProteinID:
XP_023639759
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MATMVANETFTGNPRRQLTKLFSVSLKLTVPDEPNVEPLVEPGKFGDYQCNNAMGLWSII
KGKGTEFRGPPAVGQALIKSLPTSEMVESCSIAGPGFVNVLLSAKWMAKSIENMLINGID
TWAPTLSVKRAVVDFSSPNIAKEMHVGHLRSTIIGDTIARMLEYSKVEVLRRNHVGDWGT
QFGMLIEYLFEKCPDTDSVTDTAIGDLQVFYRKAKLKFDSDQEFKEKAQHAVVRLQGGDP
VYRKAWAKICEISRNEFAKVYQSLRVELEEKGESFYNSFIPHVIEELSSKGLVEESEGAR
VIFIDGFSIPLIVVKSDGGFNYASTDLTALWYRLNEEKAEWIIYVTDIGQQQHFNMFFKA
ARKAGWLPDDDQTYPRVSHVGFGLVLGADNKRFRTRATEVVRLADLLDEAKTRSKDALIE
RGKDKEWTLEELDQTAEAVGYGALKYADLKGNRSTGYTFSFDQMLSDKGDTAVYLLYAHA
RICSIIKKSGKDIDELKKTGKITLNHAAERALGLHLLQFAETVEEACTTLLPNVLCKYLY
YLSEEFTKFYSNCQVNGSAEETSRLLLCEATAIVMRQCFHLLGITPVYKL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatggtagctaatgaaacatttacgggaaatccaagacgccaactcacaaag
ctctttagtgtgtctcttaaattaacggttcctgatgaacctaatgttgagcccttggtg
gagcctggaaaattcggagattaccaatgcaacaatgcaatgggactgtggtccataatt
aaaggaaagggtacagagttcaggggtcctccagctgttggacaggctcttattaagagt
ctccctacttctgagatggttgaatcatgctctatagctggacctggatttgttaatgtt
ctactatcagctaagtggatggctaagagtattgaaaatatgcttatcaatgggattgac
acatgggctcctactctttctgttaagagagctgtagttgatttttcctctcctaacatt
gcaaaagaaatgcatgttggtcatctgagatccactatcattggtgacacgatagctcgc
atgctcgagtactcaaaggttgaagttctacgcagaaaccatgttggtgactggggaaca
cagtttggcatgctaattgagtacctctttgagaaatgtcctgatacagatagtgtgacc
gacacagcaattggagatcttcaggtgttttacagaaaagcaaaacttaaatttgattcg
gatcaagagttcaaggaaaaagcacagcatgctgtggtccgtctacagggtggagatcct
gtttaccgcaaggcgtgggctaagatttgtgaaatcagccgaaacgagtttgccaaggtt
taccaaagccttcgagtcgagcttgaagaaaagggagaaagcttttacaactcttttatt
cctcatgtaattgaggaattgagcagcaagggattagttgaagaaagtgaaggtgctcgt
gtgatattcatagatggctttagcatcccactcattgttgtaaagagtgacggtggtttt
aactatgcctcaacagatctgactgctctttggtatcggcttaatgaagagaaagctgag
tggattatatatgtgaccgatattggccagcagcagcactttaatatgtttttcaaagct
gccagaaaagcaggttggcttccagacgatgatcaaacttaccctagagttagtcacgtc
ggttttggtcttgtccttggagcagataacaagcgatttagaactcgggcaacagaagta
gtgcgcctagctgatttgctagatgaggccaagactcgaagtaaagatgcccttattgag
cgcggcaaggataaagaatggacacttgaggagctggaccaaacagctgaggcagttgga
tacggtgcgctaaagtatgctgatctgaagggtaacagatccacaggttatactttcagc
tttgatcaaatgcttagtgacaagggagatacagccgtttaccttctttacgcccatgct
cggatctgctcaatcatcaaaaagtctggcaaagacatagatgagctaaaaaagacagga
aagataacattgaatcatgcagccgaacgagcactggggcttcacctactccaatttgct
gagactgttgaggaagcctgcaccacattattaccaaacgtattgtgcaagtacctttac
tacttgtctgaagagttcaccaaattctactccaattgtcaggtgaatggttcagcagag
gagacaagccgtctcctactttgtgaagcaacggccatagtcatgcggcaatgcttccac
cttcttggcatcacccctgtttacaagctttga
DBGET
integrated database retrieval system
