Capsella rubella (pink shepherd's-purse): 17888249
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Entry
17888249 CDS
T02984
Name
(RefSeq) coatomer subunit alpha-2
KO
K05236
coatomer subunit alpha
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17888249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17888249
Membrane trafficking [BR:
crb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
17888249
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
17888249
Exosomal proteins of bladder cancer cells
17888249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
BPS1
Motif
Other DBs
NCBI-GeneID:
17888249
NCBI-ProteinID:
XP_006293578
UniProt:
R0FUA2
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
SSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRLW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALKKKSASPADDLMR
FSQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHP
EINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPG
TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF
IARNRFAVLEKSTGQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ
QRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYI
FKLALLRKKYDHVMSMIKNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI
SVAVASATEINEKDHWYRLGVEALRQGNSRIVEFAYQQTKNFERLSFLYLITGNLDKLSK
LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLDDIAERLATEL
GDNVPSLPEGKTPSLLMPPTPIMCGDDWPLLRVMKGIFEGGLESANRGGAVDDEEEDVEG
DWGEGLDMVNADGLENRDIEAILDGAEVGEEDDEVGGWGGLEDLELPPELDTPKASANAR
SSVFVTPTQGMPVSQIWSQKSSLAAEQAAAGSFDTAMRLLHRQLGIKNFAPLKSMFLDLF
NGSHSYLRAFSSSPVVPLAIERGWSESSSPNVRGPPALVFEFSQLEEKLKSGYKATTAGK
LTEALRVFLSILQTIPLVVVETRREVDEVKELVIIVKEYVLGLQMELKRREMKDDPVRQQ
ELAAYFTHCKLQTPHLRLAYFSAMTVCYKAKNMATAAHFARGLLDTNPTIESQARTARQV
LQAAERNMTDATTLNYDYRNPFVICGSTYVPIYRGQKDVSCPYCTARFVPSQEGNICTVC
DLAVIGADASGLLCSASQVR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgaagttcgagaccaagagtaaccgagtcaagggtctcagtttccaccctaaa
cgaccatggattctcgcgagtttgcacagtggtgtgatccagctctgggattatcgtatg
ggtactttgatcgatcgatttgatgagcacgaaggacctgttcgtggtgttcatttccac
agttctcagcctttattcgtctctggaggggatgattacaagattaaagtttggaactac
aaaacacacaggtgtcttttcactcttctcgggcatcttgattatatccgcactgttcaa
tttcaccacgaaaacccatggattgtgagtgctagtgacgatcagactatccgcttatgg
aactggcagtcacggacttgtatatccgtgttgactggtcacaatcattatgttatgtgt
gcttctttccatccaaaggaagaccttgttgtatcagcatcactggatcaaactgtccgt
gtttgggacattggtgctcttaagaagaagtcagcatctcctgctgacgatctcatgcgg
tttagtcagatgaattctgatctttttggtggggttgatgctatagtaaagtacgtcctt
gaaggccatgatagaggagtaaactgggcctcttttcatcccacccttcctctcattgtc
tctggtgccgatgaccgccaagtaaagctttggcgtatgaatgaaactaaagcttgggag
gtggatacattgcgaggtcatatgaataacgtttcatctgttatgttccatgcaaaacag
gacataattgtatcaaattctgaggataaaagcatccgtgtctgggacgctaccaagcga
actggaattcagaccttccgccgtgagcatgatcgattctggattcttgcagttcaccct
gagattaatttactggcagcaggacatgacaatggtatgattgtcttcaaacttgagaga
gaacgtcctgcatttgctttgagtggtgattcattattctatgccaaggatagatttttg
cggtactatgaatattcaacccaaaaagattcccaagtgattcctatacggcgtcctggt
accccaagcttgaaccagagtcctaggaccttatcgtacagtccgaccgaaaatgcagtc
ctgatttgctcagatttggatggtggttcttacgagttgtacatcataccaaaggatagc
gttggcaggagtgatgttgtgcaagatgcaaagaggggaacagggggttctgcggtattc
attgctcgaaatcggtttgcagttctcgagaaaagcactggccaggtgttagtgaagaat
ctaaagaacgaggtggttaaaaagagttctctgcctattcccacagatgccatcttttat
gctgggactggaaatttgctttgtagatcagaggataaagtggttatatttgaccttcag
caaaggcttgttcttggtgagcttcagacaccatttgttaggtatgttgtgtggtctaac
gatatggagagtgttgctttgctcagcaaacatactatcattattgcgagcaaaaaactc
gtccttcagtgcacgcttcatgagacaatacgtgtgaaaagtggagcctgggacgacaat
ggtgtcttcatttacacaactctgaaccacatcaagtactgtcttccaaatggggatagt
ggtatcatccgaaccctggatgtcccaatctatatcaccaaggtttctggaaatacaatc
ttctgcttggaccgggatgggaagaacagggctatcaccattaatgcaactgaatacatt
ttcaagcttgcactgctgagaaagaaatatgatcacgtcatgagcatgataaagaactcc
cagctatgtggacaggctatgattgcttatcttcagcagaaaggatttcctgaagttgcc
ctccactttgttgaagacgagaggatccgattcaatttggctcttgaaagtggcaacatc
agtgtagctgttgcatccgctacagagattaatgagaaagaccactggtacagacttgga
gtggaggctcttcgccaaggaaattctagaattgttgagtttgcgtaccagcaaacaaag
aactttgagaggttatcttttctttatctcattactggtaacttagacaagctatcaaag
ttgatgaagattgcagaggttaagaacaatgtaatgggtcagtttcacaatgctctctac
ctaggagatgtgaaagagcgtgttaagatactagagaatgcaggtcatttgcctctagct
tatatcacagcttcggttcatggtttagatgacattgctgagcgactggcaactgaacta
ggagacaatgtgccctcattgcctgaaggaaaaactccatcgcttctaatgccaccgacg
cccataatgtgtggtgatgattggcctcttctgagggtgatgaaaggaatatttgaagga
gggcttgagagtgcaaacagaggaggggctgttgatgatgaagaagaagatgttgaagga
gattggggtgagggacttgacatggtcaatgctgatggtttggagaacagagacatcgaa
gccatattggatggtgcagaagtaggtgaagaagacgacgaggtaggtggatggggggga
cttgaagacttggagctcccaccagagcttgacactcctaaagcctctgctaacgcacga
tcatcggtatttgtgacacctactcagggtatgcccgtaagtcagatttggagccagaaa
tcttcccttgctgctgagcaggctgcagcaggaagcttcgacactgcaatgcgtttgctc
cacagacagcttggcataaagaattttgcgcctttaaaatcgatgtttcttgatcttttc
aatggaagccacagctatctccgtgccttttcttcatctcctgtggttcctcttgccatt
gagcgtggatggagcgagtcttccagtcctaatgtccgtggcccaccagctcttgttttt
gaattctctcagctagaagagaagctcaaatctggctacaaagccacaacagctgggaaa
ttaactgaggctctccgtgtcttcctctcgatcctccaaaccatcccattggtggtagtc
gagacgagaagagaagtcgacgaagttaaggaactggtcatcattgtaaaagaatatgta
cttggtcttcaaatggagctcaagaggagagagatgaaagatgatccggtgaggcagcaa
gagctcgcagcttacttcacgcactgtaaactccaaacgcctcacctacggctcgcgtac
tttagtgcaatgacagtctgctacaaggcaaagaacatggctactgctgctcactttgcc
agaggactgttggatacaaacccaactattgagagccaggcaaggacggctagacaagtt
ttgcaagctgctgaacgcaacatgacagatgcaaccacgcttaattacgactatagaaac
ccgtttgtgatatgcgggtcgacttatgtgccaatctacagaggacagaaagacgtttca
tgtccttactgcactgcccggtttgtaccaagccaggaaggtaacatctgcacggtctgt
gatctagcagtcattggtgcagacgcatctggtttgctatgctcggcgtcccaagtccgg
tga
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integrated database retrieval system
