Capsella rubella (pink shepherd's-purse): 17888284
Help
Entry
17888284 CDS
T02984
Name
(RefSeq) probable pectinesterase 56
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17888284
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
17888284
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
17888284
NCBI-ProteinID:
XP_006295807
UniProt:
R0HTH7
LinkDB
All DBs
Position
Unknown
AA seq
377 aa
AA seq
DB search
MALHNTSLSAFYLLILSFFTLVTISFTMNGNDELQTARDGFPLWMNNVDKKIIGATPKVL
KMNADIVVAKDGTGNYTTLKEAVDAVPDNNKKRFIIYLKRGVYKETIEIGEMKTNLMLIG
DGRDISLLTGSLNFKDGYTILKSATLATCANGFIALDLWFQNTAGPTKNQAVALRVNADL
SVIYRCRIDGYQDTLFAEQHRQFYRDCYITGTIDFIFGDAAAVFQNCEIVARKPLSGQSN
VLTAQGRIKPTRNSGFSLQRCNITASLDLSPVKGTVKSFLGRPWKNFSRVVIMQSFIGDF
IDPAGWTPMDHDVGRLSTLFYGEYENKGLGADTRRRVKWQGYKLITDPKEALEFTVTSLI
NGELWLNSTGVPYEEGL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcataacacaagtttatcagctttttacctacttattttatctttcttcact
ctagtaacaatttctttcacgatgaatggaaacgacgaactccaaacggctagggatggc
tttcccttgtggatgaataatgttgacaagaaaatcataggagctactcccaaggttcta
aagatgaacgccgacatagtagttgctaaagacgggaccggaaattatacgacgttaaaa
gaagcggtcgatgccgtacctgacaacaacaagaaaagatttatcatttatttgaaaaga
ggagtttacaaggaaacaattgaaattggggaaatgaagacaaatttaatgctcataggc
gatggtagagacatatcccttcttactggcagtttaaacttcaaggatggatacaccatc
ttgaaatctgccacgcttgcgacttgcgctaacggatttatagcgctagacctttggttc
caaaacacggctggaccgactaagaatcaggcggttgctctccgcgtgaatgccgatctt
tcagtcatatatcggtgtcgaatagatggctaccaagacacactttttgctgagcaacac
cgacaattctatcgtgattgttacatcacaggtactatagattttatctttggagatgct
gcagcagtgttccaaaattgtgagattgtggcgcgaaagcctttgagcggacagagtaac
gttctgacggctcagggacgcattaagccgacaagaaactctggcttctcgcttcaaagg
tgtaatataacagcgagtttggatctatccccggtcaaaggaacagtaaaatcattctta
ggacgtccatggaagaatttctccagagtggtaataatgcagtctttcataggcgatttt
attgatccggctgggtggactcctatggaccacgatgttggacgtttatcgacgttattc
tatggtgaatacgagaataagggtcttggagcagacactagaagaagggttaaatggcaa
ggatacaaattgattactgatccgaaggaggcattggaattcacagtgactagtcttatt
aacggtgagttgtggctcaattctaccggtgtgccttacgaggaaggactataa
DBGET
integrated database retrieval system
