Capsella rubella (pink shepherd's-purse): 17888301
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Entry
17888301 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: probable cysteine protease RD19B
KO
K01373
cathepsin F [EC:
3.4.22.41
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04142
Lysosome
crb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
17888301
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17888301
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
crb01002
]
17888301
Enzymes [BR:
crb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.41 cathepsin F
17888301
Peptidases and inhibitors [BR:
crb01002
]
Cysteine peptidases
Family C1: papain family
17888301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C1
Inhibitor_I29
Motif
Other DBs
NCBI-GeneID:
17888301
NCBI-ProteinID:
XP_006294682
UniProt:
R0HQL4
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MDHVRVLCSVSLLFALVSVALCGDEDVLIRQVVDETEEPKVLSSEDHFALFKKKFGKVSG
SHEEHHYRFSVFKANLRRAMGQQKMDPDARHGVTQFSDLTSFVXGSCGSCWSFSTTDALE
GAHFLATGKLVSLSEQQLVDCGHECDPEVAGSCGSGCNGGLMNSTFEYTFKIGGLMREXD
YPYTSTDGGRCQLDRSKIVASVSNFSVVSINEDQIAANLVKNGPLAVAINAAYMQTYIGG
VSCPYICSKWLNHGVLLVGYGSAGFSQARLKGKPYWIIKNSWGENGFYKICKGRNICGVD
SLVSTVTAAT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggatcatgttagggttttgtgctctgtttctcttctctttgcgttggtctctgttgcg
ctctgcggggacgaagacgtgctgatccggcaagtggtcgatgaaacggaggagccgaag
gtattgtcatcggaggatcattttgctctcttcaagaagaaatttggtaaggtgtctggt
tcacacgaggagcatcattacagattctctgttttcaaagctaatttaaggcgagcgatg
ggtcagcagaagatggatcctgacgctcgtcacggcgttacgcagttttcggatctgact
agttttgttnagggatcttgtggatcttgctggagttttagcactacagatgcccttgaa
ggtgctcatttcctcgcgactggcaaactcgttagtctcagtgaacaacagctcgtagac
tgtggtcacgagtgtgatccagaagtggcaggttcatgtggctctggttgtaacggtggg
ttaatgaacagtacctttgagtacacgttcaaaatcggagggcttatgcgagagtaagac
tatccctacactagcactgatggagggagatgtcaattagacaggtctaagatcgttgcc
tctgtctcaaacttcagtgttgtctctatcaacgaagatcaaatagctgcaaaccttgtc
aaaaacggtcctctagctgtggcgatcaacgcagcttacatgcaaacctacattggagga
gtgtcctgcccttacatatgctcgaagtggctcaaccacggtgtgctgctggtgggatac
ggctcggctgggttctctcaggcaaggttgaaaggaaaaccgtattggatcatcaagaac
tcgtggggtgagaatggtttctataagatatgtaaaggtcgtaacatttgcggtgttgat
agtttggtctccaccgtcactgctgccacttga
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