Capsella rubella (pink shepherd's-purse): 17888427
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Entry
17888427 CDS
T02984
Name
(RefSeq) uncharacterized protein LOC17888427 isoform X1
KO
K03539
ribonuclease P/MRP protein subunit RPP1 [EC:
3.1.26.5
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
17888427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17888427
03016 Transfer RNA biogenesis [BR:
crb03016
]
17888427
03029 Mitochondrial biogenesis [BR:
crb03029
]
17888427
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
17888427
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
17888427
Transfer RNA biogenesis [BR:
crb03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
17888427
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
17888427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P_p30
T6SS_HCP
Motif
Other DBs
NCBI-GeneID:
17888427
NCBI-ProteinID:
XP_006293773
UniProt:
R0FUT3
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MGFFDLSISYNEPPRSGGKEVAGGKTLRLKLATKAMELGYVGIAHNRSIKGVMSEKDSCT
IPLLTLGSLIKVAPRLTSSVGFHRDLLGVPRATPFRQYTRLTVHVESNAQCLSLNSGNPV
LKSYDIIAVRPMNQNVFDYACEKAEVDMISIDFTDKMLFRLKHPMVQAAIKRGIYFEIKY
SDLLVDAQTRRQVISNAKLLVDWTRGKNLIISSGAPSVTEIRGPNDVINLMSLLGLSTEK
ARAALSKNCRNMIAKLLKKKRFHKEAVRVELLSSGDTFSLEQPLSGDCMKWDPLSSGEGD
MLLDDLAKAFDATNAVAHKSSKAIDFTSVLDGLPKHGFRVEDIVGTEPLTQPPAAKVTDA
QVNTNQVSEVVMAVAASSDDNPQEIETISQIDMHMSEDDTKVEPTTNVLRGEAITLRKCS
ASHGQGFLVQNQTAASFTLIRCTKSDAASDVSMNIEATSEGGSLSPSKSDRVIPQSPVEV
INMGNTTSDEVSVDENNKERATTGPASNDEMHITEPGDHASVDDVKHIAEPEHHTSIADE
MKTDCPSEANHEEYMEVTVEDQKRETGDSNINLPNLSSETTDLLRESGKSLSPEAVGQDH
DQVQRLESKETELKEEEASVSYDNTFEITMEQKKVEESTIEDKQEGKSETIHLAQVQSSG
SNNDTRSGKTQAKRRRVRPPQLLPFMPFLLQSRFKRISRKRKHGRA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgggattcttcgatctaagtatttcgtacaatgagccgccacgatcaggcggaaaggaa
gtcgccgggggaaaaaccttgcggttaaagctcgccacgaaagccatggagctgggttat
gttgggatcgcacataatcgttcgatcaaaggcgtgatgtcggaaaaggactcttgtacg
atccctcttctcacccttggttctctgatcaaagtcgctccgaggttaacttcttctgtt
ggattccatcgcgatttactcggcgttccgcgagctactccgtttcgtcagtacacgcgt
ctcactgttcatgtggagagtaatgctcagtgtctgagtttgaattctgggaatcccgtt
ttaaagagttatgatattattgctgttaggcctatgaatcagaacgtgttcgattatgct
tgtgagaaagctgaggttgatatgatttcgattgatttcacggacaagatgttattccga
ttgaagcatccaatggttcaagctgctatcaagcgaggtatttactttgaaatcaagtac
tctgatctcctagtggatgcacaaacaaggagacaagttatatcgaatgctaagttactg
gtggattggactagggggaagaatctgattatatcaagtggtgctccttcagtcacagaa
attagaggtccaaacgatgttataaatctcatgtccttgcttggactctctactgaaaaa
gccagagctgccctttcaaaaaattgtaggaatatgatagccaagcttttaaagaaaaaa
cggttccacaaagaagctgtcagggttgaattactttcttctggtgatacatttagcctt
gaacagcctttgtctggagattgtatgaaatgggatcccctttctagtggtgaaggtgac
atgcttttggatgatcttgcaaaggcttttgatgccacaaatgctgtggcacacaaatcc
tctaaggcgattgatttcacctctgttctcgatggcttgccaaaacatggtttccgggtt
gaggatattgtaggaactgaaccattgactcagcctcctgcagctaaggtgactgacgca
caggtgaacactaatcaagtttctgaagtagttatggctgtggcagcttcatctgatgat
aatcctcaggaaatcgaaaccataagccaaattgacatgcacatgtctgaagatgacact
aaggtggaacctacaacaaatgtcctcaggggagaagcaattaccctaaggaaatgcagt
gccagccatggccaggggtttttggtgcaaaaccaaacagctgcttcctttacactgata
agatgcacaaagtcagatgcagcttcggatgttagcatgaacattgaggcgacttctgag
ggtggatcattgtcaccatcaaaaagtgatcgtgtgatcccacaaagtcctgttgaagtg
ataaacatgggaaatactacttctgatgaagtctcagtggacgaaaacaacaaagaaaga
gcgactactggtcctgctagtaatgatgagatgcatatcactgagcctggagaccacgca
tccgttgatgatgtgaagcatatcgctgagcctgaacaccacacatccattgctgatgag
atgaaaactgattgtccttcagaagcaaatcacgaggagtacatggaggtgacagtggaa
gaccagaaacgtgaaacaggtgacagtaatattaatcttcctaacttatcctctgagact
accgatttgctaagagaatcaggtaaatctctcagtccagaggcagttggacaagatcat
gaccaagtacaaagattagagtccaaggagacagagctcaaggaagaggaggcatcagta
tcatacgataacacctttgagataacaatggaacagaagaaggtggaagagtcaacaatt
gaagacaagcaggaaggaaagagtgaaaccattcacctagcccaagtccaatcctctgga
agtaacaatgacacaagatcaggtaagacgcaagctaagaggagaagagttcgaccaccg
caactactgcctttcatgccatttctacttcaatcaagatttaaacggatcagtagaaaa
agaaaacatggaagagcttga
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