Capsella rubella (pink shepherd's-purse): 17888465
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Entry
17888465 CDS
T02984
Name
(RefSeq) probable sphingolipid transporter spinster homolog 3 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
crb02000
]
17888465
Transporters [BR:
crb02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
17888465
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Ortholog
Paralog
GFIT
Motif
Pfam:
MFS_1
OATP
Motif
Other DBs
NCBI-GeneID:
17888465
NCBI-ProteinID:
XP_023640793
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MVTKEEDCLPPTPLTELETVRSIEIVESSSLSPVWLLVIFCIINLLNYMDRGAIASNGVN
GSTKSCNDKGKCTLASGIQGHFNLSNFEDGVLSSSFMVGLLIASPIFAILAKSFNPFRLI
GVGLTVWTVAVFGCGSSFAFWFIVLCRMFVGVGEASFISLAAPFIDDNAPQKQKAAWLGM
FYMCIPSGVALGYVYGGYVGKHFSWRYAFWGEAALMAPFAVLGFVMKPLQLKGFPSTESI
KTVRSIEVMTPSVGAETSTNDNHLQVGNEIEHDQFEVSTEPSNRRSSYANAVLKSFTGFA
KDMKVLFKEKVFVVNVLGYVSYNFVIGAYSYWGPKAGYNIYKMRNADIIFGAVTIISGIV
GTLSGGFILDRVSATIPNAFKVMKKLFLQFSEFSGFYLYSWIQLLSGATFLGAVFCFTAF
TLKSLYGFIALFALGEFLVFATQAPVNYVCLHCVKPSLRPLSMAISTVAIHIFGDVPSSP
LVGIVQDHINSWRKTALMLTSILFLAATIWFTGIFINSVDRFNQEGTVDEKSQRTREHVS
P
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaaagaagaagattgtcttcctcctactcctctcacggagttagagactgtt
cgaagcatagaaatcgtcgaatcttcctctctatctcccgtttggttactggtgatcttt
tgcatcattaacttgttaaattacatggatcgtggtgcgatagcgagcaatggtgtaaat
ggaagtactaagagttgtaatgataaaggcaaatgcactcttgcttctggaattcaggga
cattttaatctaagtaatttcgaagatggtgtattgtcatcttcatttatggttgggcta
cttattgcatcaccgatctttgctatattggccaaaagcttcaatccatttagacttatt
ggagtaggtcttactgtttggacagttgcagtttttggctgtggcagttcctttgccttt
tggttcatcgtcttatgccgtatgtttgttggtgtaggtgaagcttctttcattagtctt
gcagctccatttatagatgacaatgctcctcagaaacagaaagctgcatggcttggaatg
ttttacatgtgtataccaagtggtgttgctcttggttatgtctatggcggatatgtcggg
aaacattttagttggcggtatgcgttttggggtgaagctgctttaatggctccatttgct
gttcttggttttgtaatgaaacctttgcagttaaaagggtttccttctactgaatcgata
aagacggttagatcaattgaagtaatgactccatcagtaggcgcagagacatcgacaaac
gataatcatcttcaggttggtaatgagattgagcatgatcagtttgaggtctcaactgaa
cctagcaatcgtagatcaagttatgcgaacgcggttttgaaatcatttactggatttgca
aaagacatgaaagttctgtttaaagaaaaagtctttgttgttaatgtcttaggttatgta
tcatacaatttcgttataggagcatactcatactggggaccaaaggctggttacaatatt
tataaaatgagaaacgcggatatcatcttcggggcagtaactatcatttctgggatcgtt
ggaacattatcaggaggctttatacttgaccgcgtcagtgctacaattccaaatgctttt
aaggtaatgaaaaagcttttcttacagttctctgaattttcaggtttttatctttactct
tggattcagctcttatccggagcaacatttctcggggcggtattttgcttcactgcattt
acactgaagagtttatacggtttcatagctctctttgcgttaggagagtttcttgtgttt
gctacacaggctccagtgaattatgtgtgtttgcattgtgtgaagccaagtttgcgacca
ttatcaatggctatctccacagtcgcaattcacatatttggcgatgttccttcttcgcct
cttgttggtatcgttcaggatcatatcaacagttggagaaaaaccgcattgatgcttaca
tcaattctgttcttagctgctacaatatggtttacaggtatattcataaacagtgtagat
cggttcaatcaagaaggaactgtagatgagaagagccagaggactcgagaacatgtatct
ccatga
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