Capsella rubella (pink shepherd's-purse): 17888504
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Entry
17888504 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC17888504
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
crb04121
]
17888504
Enzymes [BR:
crb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
17888504
Ubiquitin system [BR:
crb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
17888504
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
17888504
NCBI-ProteinID:
XP_023640650
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MDDSCAVCAEGLEWVAYGSCGHREVCSTCVLRLRFIFSDTRCCICKTECPVVFVTKYCLR
LVQALGDYTKSISDFSTSFPSVPKEGGVGSFWYHEETKVFFDDINQYTKIKAMCRLSCTS
CEETKKIQPKKGPNNRVRFKSVEQLKDHLNHQHKLHMCSLCLVGRKVFICEQKLFTTAQL
NQHISSGDSEVDGSENERGGFTGHPMCEFCKRPFYGDNELYTHMSREHYTCHICQRLKPG
QYEYYGNYDDLEVHFRTDHFLCEDETCLAKKFIVFQIEAELKRHNSIDHGGRMSRSQQSA
SLEIHASFQYKNSRRGRRRTSHREPNHAALESQESYAINDGSSLLQHVGSSGGSRLEEYY
FPPLSVQANRGPSRFGHNSESLHSNTMTTRLRHQTNRSATSGSSRAWPALNRGPTQASIA
SSVQSYGASAQSHSRHHGRVEITRTFASATPHDARSEDTSVVGCSSGSSLSSGNAKRNNH
HLSSTPKMSDIRSLEQPCHSNSPISAAPNRRSSSTSANAANILVAQGVSDVQSDNKSLVE
KVRASLGHDEELFMAFKGTSGKYRHGSIDARTYLEYVNGYGLSHLILDLARLCPDPQRQK
ELIDTHNACLGGGNKGKAVKVENSSDSKGDRVVEAVRKLQFSEKSQDEDKDAYRSDKGKT
KVTTLVNSSSAGVGLGNTDNQHKKTSKFLRKRLDEISMAAVVDHRNTNPEPEPESKKDNS
KRSQNXLPVDCHFAVLGEEEVQNSSSSNTNPLAFAFSGRW
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagttgcgccgtttgcgcggagggtctggaatgggttgcttacggatcttgt
ggtcacagagaggtttgctcaacttgcgtccttcgtcttcgcttcatattcagtgatact
cgatgttgtatctgcaaaaccgaatgccccgtcgtcttcgttacaaagtattgtctccgt
ctagtgcaggctttgggtgattatacaaagtcgatcagtgatttctcgactagttttcca
tcagtacccaaggaaggtggagtaggatctttttggtatcatgaagaaacaaaagttttc
tttgatgacataaaccagtacacaaagattaaggcaatgtgcagactctcttgcacttcg
tgtgaggagacgaagaagatccaaccaaagaaaggacctaacaatcgtgtgcggtttaag
agcgttgaacagttgaaagatcatttaaaccatcagcacaaattgcatatgtgcagttta
tgtcttgtaggtcgtaaggtcttcatttgtgagcaaaagttgtttactacggcacaactg
aatcagcatataagtagtggtgactcggaagtggatggaagtgagaatgaaagaggtggt
ttcactggtcatcctatgtgcgaattctgtaagcgtccattctatggtgataatgagcta
tacactcatatgtccagagagcactacacttgtcatatatgccaaaggctgaagccagga
caatatgaatattatggcaactatgacgatttggaggttcattttcgaactgaccatttc
ctatgtgaagacgaaacctgccttgctaagaagttcatagttttccaaatcgaagctgag
ttgaaaaggcataattctattgatcatggaggtagaatgtctcggtctcaacaaagcgca
tcactagagatacacgccagtttccaatacaagaacagtcgccgtggaaggcgccgaacg
tcccatcgcgagcctaatcatgcagctctggaatctcaagaatcttatgccattaacgac
ggtagttctcttcttcaacatgtggggagctctggaggttcacgtcttgaagaatattat
tttcctccactctctgtgcaagcaaaccgaggcccatcaaggtttggacacaactcagag
agcttacatagtaacaccatgactactcgtctaagacatcaaacaaatcgaagtgcaact
tctggttcttctcgagcttggccagcgttaaaccgaggcccaacacaagcatcgattgca
agcagtgtacaatcttatggtgcttctgctcaatcccattctaggcaccatggcagagtt
gaaattactagaacatttgcttctgcaactccacatgatgctcgtagtgaagatacctca
gttgttggatgctcatctggttcttcgctgagttccggcaatgcaaagaggaataatcat
cacttgtcttcaacacccaaaatgtctgatataagatcactggagcagccttgtcattct
aattctccaatttctgctgcgccaaatcgcaggtcatcatccaccagtgcaaatgcagcg
aacatcctagtcgcacaaggtgtttctgatgtacagtctgacaataaaagtttggttgaa
aaagtacgtgccagccttggacacgatgaagagttattcatggcattcaagggtacatca
gggaagtatcgtcatggttccattgatgcaagaacttacttggaatatgtgaatggttat
ggtttgtctcacttaattttagatcttgctaggctttgccctgaccctcagaggcagaag
gaactcattgatacccacaatgcgtgcttgggaggaggaaataaagggaaagctgtgaag
gttgaaaatagcagtgattccaagggggatagggttgtggaagccgtgaggaagttacaa
ttctctgaaaaatctcaggatgaagacaaggatgcatatcgttcagataaaggcaaaaca
aaagtgacgactttggtgaattcttcatctgctggggtgggattaggtaacacagacaac
caacataagaaaacttcgaagtttctcagaaaacgtctagacgaaatatcaatggctgca
gtagtagatcataggaatacgaacccagagcctgaaccagaatctaagaaggataactcc
aaaaggagccagaacnncctcccggtggattgccacttcgcggtgcttggcgaagaggaa
gtgcaaaactcttcatctagtaacacaaatccattggcttttgctttctcaggaagatgg
tga
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