Capsella rubella (pink shepherd's-purse): 17888905
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Entry
17888905 CDS
T02984
Name
(RefSeq) serine/threonine-protein kinase ATG1c isoform X1
KO
K08269
serine/threonine-protein kinase ULK2 [EC:
2.7.11.1
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
17888905
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
crb01001
]
17888905
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17888905
03029 Mitochondrial biogenesis [BR:
crb03029
]
17888905
Enzymes [BR:
crb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
17888905
Protein kinases [BR:
crb01001
]
Serine/threonine kinases: Other
ULK family [OT]
17888905
Membrane trafficking [BR:
crb04131
]
Autophagy
Autophagosome formation proteins
Atg1 complex
17888905
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
17888905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
MIT_ATG1
PK_Tyr_Ser-Thr
Kdo
Pkinase_fungal
YrbL-PhoP_reg
APH
Motif
Other DBs
NCBI-GeneID:
17888905
NCBI-ProteinID:
XP_006296185
UniProt:
R0HYD8
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MAQFTGRIVGDYLVGRQIGSGSFSVVWEARHRVDGTEVAIKEIAMDRLNKKLQESLMSEI
YILRRINHPNIIRMIDMIKSPGKVHLVLEYCKGGDLSVYVQKRGSVPEATAKHFMQQLAA
GLQVLRDNNIIHRDLKPQNLLLSTDENDADLKIADFGFARSLQPRGLAETLCGSPLYMAP
EIMQLQKYDAKADLWSVGAILFQLVTGRTPFTGNSQIQLLQNIIRSTELQFPVDCRDLSL
DCIDLCQKLLRRNPVERLTFEEFFNHPFLSDRQAYDFSRSRLGLRTMDGFLSSESSPSRN
MEESSQEDCLPFLLDDDSSGPDGSPSYLKKTSSSGFNVDTRVGRREGDSSPLRYTEHTSR
HSRINQREGNDRFRFDTQINSDRRNRREPTELTDSRSLIAPGRVDDSQDSMDQDFVLVSG
PPVDMPSSSLSSSKPYNFPFKSPSPPVELFNRSINSTAPMPIIGATGDNISRFDSLDSQN
SAPSTSHGSLDLGDAFEQPSTHSLTRIRSLRKCAATIAELVHERIESDKHLEAFSIQLAI
LAIWKQALHICHTQAISALEGSPSQDFNRLRSSSLKHDTHMSDKITGLSHDGSEEISSQI
QRQFIQEIELAEELAKSIEPGNIKMPDAMETIFEEALDLGKLGGVKEVMGDIENAGNQYS
KAVRLLVFLLVEAPMLILNPPLSLTNSVRYRLRTYIDFLSRRLKHLQSHRKSSGGQMQGS
SLAMMNRQS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggctcagttcacaggtcggatcgttggagactacttggtgggtcggcaaatcgggtcg
ggttctttctcggtcgtttgggaagcgaggcaccgcgttgacggcactgaggttgctatc
aaggagatcgccatggatagacttaacaagaagcttcaggagagtctcatgtctgagatt
tatatcttgaggaggatcaatcatcctaatatcatccgtatgatcgacatgatcaagtct
cccgggaaagtacatttggtgttggagtactgcaaaggaggtgacttgtctgtgtatgtc
cagaaacgtggaagtgtccctgaagctactgctaagcatttcatgcagcaattagcggcc
ggcttacaagttcttcgtgacaataatattattcaccgtgatttaaagcctcagaatctt
cttctatccacagatgaaaatgatgcagatctgaagattgctgattttggatttgcaaga
tcgctgcaacctagggggctcgcagaaactttatgcggttcaccattgtatatggcccca
gagattatgcaacttcaaaagtatgatgcaaaggcagatctctggagtgttggtgcgata
ttatttcaacttgtgacaggcagaactccgtttacaggaaacagtcaaattcagttgctt
caaaacataataagatcaaccgagttacagtttccagtggactgtagagatttaagtttg
gactgtatagatctgtgtcagaagttactgcgccgtaatccagtggaacgtttgacattt
gaagagttctttaatcacccttttctttcggacaggcaggcatatgatttctcaaggagt
agattgggattaagaacaatggacggttttctttcttctgaaagcagcccctcgagaaac
atggaagaaagttctcaagaagactgtttgccattccttctagatgatgattctagtgga
cctgacgggagcccttcctatttgaaaaagacgtcgtcctctggatttaacgttgatacc
agagttgggagacgggagggggattctagtcctttaagatatactgaacatacttcccga
catagtagaatcaaccaaagagagggaaacgatagatttagatttgatactcaaataaat
tcggataggagaaaccgtagggaacctacagaattgactgattccagatcacttattgct
ccaggacgagtagatgattctcaagactccatggatcaagattttgttctcgtatctgga
ccaccagtggatatgccatcatcttcattgagttcttcgaagccgtataatttcccattc
aagtctccgtctcctcctgtagagttattcaacagaagcataaattcaacggctcccatg
ccaataattggtgctactggcgacaacatcagtcggtttgatagcctagacagccagaat
tctgccccgagcacttctcatgggtctctggatcttggggatgcttttgaacagccatca
actcacagcctgacaagaatcaggtctctaagaaaatgtgctgcaacaattgcagaatta
gttcatgaaaggattgaatctgacaaacacttagaagctttctccatccaattggcgatt
ctggcaatttggaaacaggcactgcacatatgtcatactcaggcaatttcagctttggaa
ggaagcccaagccaagactttaacagactaagaagtagcagcctgaaacacgatacccac
atgtctgataaaattactggtctgagccatgatggatctgaggagatatcctctcagatt
cagaggcagtttatccaggagattgaacttgctgaagaacttgccaagagtattgaacct
ggaaatataaaaatgccggatgcaatggagacgatattcgaagaagcccttgatcttgga
aaacttggaggagttaaggaggttatgggagatatagagaatgctggaaaccaatattcg
aaagcggtgcggttgctggtatttcttctagtagaagcaccaatgctgattctgaatcca
ccattgtctcttacaaactcagtcaggtatcgactcaggacatatatcgatttcctcagc
agaaggttaaaacatctgcaatcacacagaaaaagttcaggtggtcagatgcaaggatca
tcattagccatgatgaacagacaatcataa
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integrated database retrieval system
