Capsella rubella (pink shepherd's-purse): 17888953
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Entry
17888953 CDS
T02984
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
17888953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17888953
03110 Chaperones and folding catalysts [BR:
crb03110
]
17888953
03029 Mitochondrial biogenesis [BR:
crb03029
]
17888953
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17888953
Enzymes [BR:
crb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
17888953
Messenger RNA biogenesis [BR:
crb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
17888953
Chaperones and folding catalysts [BR:
crb03110
]
Heat shock proteins
HSP60 / Chaperonin
17888953
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
17888953
Exosome [BR:
crb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
17888953
Exosomal proteins of other body fluids (saliva and urine)
17888953
Exosomal proteins of breast cancer cells
17888953
Exosomal proteins of colorectal cancer cells
17888953
Exosomal proteins of bladder cancer cells
17888953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
17888953
NCBI-ProteinID:
XP_006293894
UniProt:
R0FV42
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MYRLVTNVASKARIARNCTSQIGSRLNSTRNYAAKDIRFGVEARALMLKGVEDLADAVKV
TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFQDRVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLQSRARMISTSEEIAQVGT
ISANGDREIGELIAKAMETVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNPK
TQKCELEDPLILIHEKKISNIGAMVKVLELALKKQRPLLIVAEDVESDALATLILNKLRA
GIKVCAVKAPGFGENRKANLHDLAALTGAQVITEELGMNLDNIDLSMLGNCKKITVSKDD
TVVLDGAGDKIAIGERCEQIRSMVEASTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELGNLSTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGAVIVGKLLEQDNPDLGYDAAKGEYVDMVKSGIIDPLKVIRTALVDAA
SVSSLLTTTEAVVTEIPTKEKDASPGMGGGMGGMGGMGGGMGF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggctggtcaccaacgttgcttcaaaagctaggattgctagaaactgtacaagc
cagattggaagcaggctcaattctactaggaattatgcagcgaaagacattagattcggt
gttgaagctcgtgctttaatgcttaagggtgtcgaggatcttgccgatgctgttaaagtc
actatgggacccaagggtcgtaatgtcatcattgaacaaagctggggtgcaccaaaggtg
acaaaggatggtgtgactgttgccaagagcattgagttccaggacagagttaagaacgtt
ggtgccagtcttgtcaaacaggttgcaaacgccacaaatgacgtagctggtgatggaacc
acatgtgctacagtccttactcgggctatcttcacagaaggttgtaaatcagttgccgct
ggaatgaatgcgatggacctaagacgtggtatcaaactggcagttgatactgttgtgaca
aacttgcagagtcgagcacgcatgattagcacttctgaagaaatcgcccaagtgggaaca
atatcagctaatggagatagagaaattggtgaactgattgcaaaggccatggaaactgtc
ggcaaagagggagtgatcacaattcaagatggcaagaccttgtttaatgaactagaagtt
gttgagggtatgaagattgacaggggatacatttccccttacttcataacaaacccgaaa
acccaaaaatgtgaactagaagatcctctcattcttatccacgagaagaaaatttccaat
ataggcgctatggtgaaagtcttagaactggccctcaagaagcaaaggccgctactgatt
gttgctgaggatgtggagagtgatgctcttgccaccctaattctgaacaaacttcgtgct
ggaatcaaggtatgtgcggtgaaggcccctggttttggggagaaccggaaggccaattta
catgatctagctgccctcactggagcccaggtaataacagaggagttaggtatgaatctc
gacaacattgacctcagtatgttgggaaactgcaagaagataactgtgtccaaagatgat
actgttgttctcgatggggctggtgacaagatagcaattggggaacgatgtgagcagata
cgatccatggttgaagccagcacatctgattatgacaaggagaagttgcaagaaaggttg
gctaagctttcgggtggtgttgctgtactaaagattggaggtgcgagtgaggcagaagtt
agcgagaagaaagatagagtaactgatgctctaaatgcaactaaagcagctgtagaagag
ggtattgttccaggtggtggtgttgctcttttgtatgcttcgaaagaacttgggaatctt
tccacagctaactttgatcagaaaattggtgttcaaatcattcaaaacgctctcaagaca
cctgtttacacgattgcttccaatgctggagtcgagggtgcagttatcgtaggcaagctt
ttggagcaagataatcccgacctcggttatgacgctgccaaaggagaatatgttgacatg
gtaaagtcaggtattattgatcctttgaaagtgatcagaaccgcattggttgatgctgca
agtgtctcctctttgttaactacaacggaagcagttgtgactgagattccaacgaaggag
aaggacgcgtctccaggtatgggtggcggcatgggtggtatgggcggtatgggaggagga
atgggtttctga
DBGET
integrated database retrieval system
