Capsella rubella (pink shepherd's-purse): 17888959
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Entry
17888959 CDS
T02984
Name
(RefSeq) two-component response regulator ARR12
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17888959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
crb03000
]
17888959
Transcription factors [BR:
crb03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
17888959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
DNA_pol_phi
KaiA_N
Motif
Other DBs
NCBI-GeneID:
17888959
NCBI-ProteinID:
XP_006293853
UniProt:
R0FVX1
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MTVEQNFEALDQFPIGMRVLAVDDDQTCLRILESLLRHCQYNVTTTNQAQKALELLRENK
NKFDLVISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPV
RIEELKNIWQHVVRKNRGSNNGEKRDGSGNEGVGNSDQNSGRANRKRKDQYNEDEDEERD
DNDDSSAAKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQK
FRLYLKRISGVTNQQAIMANSDLHFLQMSSSLNGLDSFHHRPIPVGPGQFHGGAPPMRPF
PSNGILGRLNTPSGIGVRNLSSPPAGMFLQNQTDLGKFHHVSSSLPLNHSDGGNILQGLP
MPLEFDQLQANNNNNNNNNNNIRNMNNNKSIAGSSMAFPSFSTHQNSLIRAPNNNLVVLD
GHPQASPPGFPGHQNNKRLEHWSNAVSSSTLPPPQTSNSIHHQFDVSPLPHSRPDPLEWN
NVSSSYSIPFCDSASTMSPQALDTPNPGAFSRNTDFNSNANANAQPGGFYDSLQMRQSGN
YGPTTDAMLSTNPKEGFVVGQQKLQSGGFMSADAGSLDDIVNSTMKQEQSQGELSGGDLG
YGGFSSLRTCI
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgactgtggaacaaaatttcgaagctttggatcagtttcctataggaatgagagttctt
gctgttgatgatgaccagacttgtctcagaatccttgaatctttgcttcgtcactgccaa
tacaatgttacaacgacgaaccaagcacaaaaggcattagagttattgagagagaacaag
aacaagtttgatctggttattagtgatgttgacatgcctgacatggatggtttcaaactc
cttgagcttgttggtcttgaaatggacctacctgtcataatgttgtctgcgcatagtgat
ccaaagtatgtgatgaagggagttactcatggtgcttgtgattatttgttgaaacctgtt
cgtattgaggagctgaagaacatatggcaacatgttgtgagaaagaaccgtgggagtaat
aatggtgagaagagagatggatcgggtaatgaaggtgttggtaattctgatcagaacagt
gggagagctaataggaaacgtaaagatcagtataatgaagatgaggatgaggaaagagat
gataacgatgattcgtcagctgcaaagaagcaacgtgttgtttggactgtcgagctgcat
aagaagtttgttgcagctgttaatcagttgggatatgagaaggctatgcctaaaaagatt
ttggatctgatgaatgttgagaagctcactagagaaaatgtggctagtcatcttcagaaa
tttcgactttacttgaagaggatcagtggtgtgactaatcaacaagctattatggcaaac
tctgacttacattttttgcaaatgagttcttctctcaatggacttgacagtttccaccac
cgccctatccctgttggacctggtcagttccatggtggggctcccccaatgagaccgttc
ccttcaaatgggattcttggccgactcaatactccttcagggatcggtgtgcgcaacctt
tcttctcctcctgcaggaatgttcttgcaaaaccagactgatctcggaaagtttcaccat
gtctcctcatcacttcctctcaatcacagtgatggaggaaacatacttcaagggttgcca
atgcctttagagttcgaccagcttcaggcaaacaacaacaacaacaacaacaataacaac
aacattagaaatatgaacaataacaagagcattgcagggagctccatggcttttcctagc
ttctctacacatcaaaactcactcatccgagctcctaataacaatctcgtggttctagat
ggtcacccacaagcatctcctccaggctttccgggacaccagaacaacaaacgtttggag
cattggtcaaacgctgtatcctcatcaactcttcctcctccccagaccagtaatagcatc
catcatcagttcgatgtctccccattaccgcattctagacccgaccctttggaatggaac
aacgtttcatcaagctactctataccattctgtgactctgccagcacaatgagtcctcaa
gccttggatacaccaaatccaggagctttcagcagaaacacagatttcaattcaaatgca
aatgcaaatgcgcaacctggaggcttttatgattcattgcagatgagacaatcaggcaat
tacggtccaacaactgatgctatgttgagtactaacccgaaagaagggtttgttgtgggg
cagcagaagttacagagtggtggtttcatgagtgcagatgctggctccttagatgatata
gtcaactccacaatgaagcaggaacaaagccagggagaattgtctggaggagatttggga
tatggtggctttagttcactcagaacatgcatatga
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