Capsella rubella (pink shepherd's-purse): 17888984
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Entry
17888984 CDS
T02984
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 12
KO
K05391
cyclic nucleotide gated channel, plant
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17888984
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crb04040
]
17888984
Ion channels [BR:
crb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
17888984
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
17888984
NCBI-ProteinID:
XP_023639951
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MDIQMTSSARSGTGNGFYEKIETSEKWSKYWRKSFLLVCVVALAIDPLFLFIPEIDYLKL
CIGFDETLRTTVCVLRILIDIIYAYQIIRSQTSLRGKMSQRSKLFYTIVDIVSLLPIPVV
MVLLVRTEWSNNLVTNRVLKWTIVVQYIPRIIRIYPIYRIVTKTTVTISESKWIGALLNL
LLFLMCSYVFGAFWYVTGIEKLSICWHNFWVNKTMSPGFGNFTVWQRPGNVTKLYCPHLV
DGENNSVFLKNSCPIRESAEIPRPSKYLVGLENKTIYDFGMYGEVVKSEVGSINLRNFPK
KFFYCFWWGLRNLSTFGESLKPGNSATDILLAIVICACGLFLVAVLIGNVQKYLLTSTVR
SDEMIERKKDTEAWMTFRKLPEDLKKRIKENEKTLWKNVRGTDEESLLRRLPEELRRETQ
PYLDN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggatattcagatgactagttctgcaaggtcgggtactgggaatggtttttacgagaag
atagaaacctctgaaaagtggagcaaatactggaggaagtcctttctcttagtttgtgtg
gttgctttggctattgatcctctgtttctctttattcctgaaattgattatctaaaatta
tgcatcggtttcgacgaaacgcttagaacaacagtttgtgtccttcgtatcttgattgac
ataatctatgcgtatcaaatcattcgttctcaaacatctttgagaggcaagatgagccaa
agaagtaaactcttctacactattgttgacattgtttctcttctccccattcctgtggtg
atggttctcctcgtccgtactgagtggtctaacaatctcgtgacaaatagagtactcaag
tggaccatagttgttcagtatataccaaggatcattcgcatctatccgatttacagaatt
gtgacaaaaaccactgttacaatatcagaatcaaagtggattggagctcttttgaacctt
ttgctcttcctgatgtgcagttatgtgtttggggcgttctggtacgttactggaattgaa
aagctaagcatatgctggcataacttttgggtgaataagactatgtctcctggctttggg
aatttcactgtttggcagagacctggcaatgtcacgaagctgtattgtccacatttagta
gatggtgaaaacaacagtgttttcctgaaaaattcatgcccaataagagaatctgcggaa
atcccaagaccatccaaatacttggtcgggctcgaaaacaaaacgatatacgacttcggt
atgtacggtgaagtggtgaagtctgaggtgggaagtattaatctaaggaattttccaaag
aagttcttctactgcttttggtggggtcttcgaaatcttagtacgtttggcgaaagcctg
aagccaggcaactcggcaacagatattcttttggctatcgtcatatgcgcttgtggttta
ttcttggttgctgtacttattggaaacgttcagaaatacttgctaacaagtaccgtcaga
tcagacgaaatgatcgagagaaagaaagacacagaagcatggatgacatttaggaaacta
ccagaagatcttaagaaacgcattaaggaaaacgagaaaaccctttggaaaaatgtcagg
ggcactgatgaagaatctcttcttcgtcgcttgccggaagagctcagacgtgaaactcaa
ccatatcttgataattga
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