Capsella rubella (pink shepherd's-purse): 17889187
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Entry
17889187 CDS
T02984
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17889187
03036 Chromosome and associated proteins [BR:
crb03036
]
17889187
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
17889187
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
17889187
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
17889187
microRNA pathway
RISC loading complex
17889187
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
17889187
NCBI-ProteinID:
XP_006296291
UniProt:
R0HHN3
LinkDB
All DBs
Position
Unknown
AA seq
1023 aa
AA seq
DB search
MSNRGGHGGGGRGGRGGRRSDQRQDQSSGSVAWPGLPQTSGGGRGVSGGRGRGNVGTGDL
TATEVPVSGGRGRGNVGRGGFTGDPTTASQVSGGRGRGNVGRGGFTGAPTASQVVPSVAS
SSKTMVVASASASSSKEERTVVTEVSDAAAALAKVQISPPETKPESTLPPSSSKAVPLQL
RPGRGTVGRKITVRANHFLVQVADRDLYHYDVTINPEVISKTVNRNVMKALVSMYKESHL
GGKSPAYDGRKSIYTAGALPFESKEFVVDLTEKLADGSPGKDRKFKVAIKQVASRPDLYQ
LQQFLRQRQREAPYDVIQLLDVVLRDQPSKDYVSVGRSFFSTVFGKGELGDGVEYWRGYF
QSLRLTQMGLSLNIDVSARSFYEPIVVTDFISKFLNIRDMSRPLNDSDRLKVKKVLKTVK
VKLLHWKNGKTAKITGISTCPISQLRFTLEDKSEKTVVQYFFERYNHRVRYPALPAIQTG
NDSRPVYIPMELCQIVGEQRYTKRLNEKQVTALLKATCQRPEERERSIQRLVVGNKYDSP
LVKEFGMSVTSQLASIEARVLPPPMLKYHDSGREKMVNPRQGQWNMINKKMVNGARVDRW
TCVNFSRRIDQRLPEEFCYQLTEMCVSKGMQFNPAPVIPLISDPRQSIEEALHDIHKRAA
GIQLLIVILPDVTGSYGKIKRICETELGIVSQCCQPRQVVKLNNQYMENVALKINVKTGG
RNTVLNDAIRRNIPLITDRPTIIMGADVTHPQPGEDSSPSIAAVVASMDWPEITKYRALV
SAQAHREEIIQDLYKLEQDPQRGLIHSGLIREHFIAFRKATGQIPSRIIFYRDGVSEGQF
NQVLFHEMNAIRKACNSLQKDYLPRVTFVIVQKRHHTRLFPAEHGNRDMTDKSGNILPGT
VVDTQICHPNEFDFYLNSHAGIQGTSRPAHYHVLYDENGFSADAMQTLTNNLCYTYARCT
KAVSIVPPAYYAHLAAFRARYYMESEFSDGGSSRSRNTTTTAGAVASKLPAVKDNVKDVM
FYC
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcgtggcggtcacggcggcggtggtcgtggcggaagaggaggaaggaggtct
gaccagagacaagatcagtcttctggttccgttgcttggcctggtttaccacaaacctcc
ggtggtggtcgtggtgtttctggtgggagaggtcgtggtaacgtcgggaccggagatctg
acggcgacggaggttcctgtttctggtgggagaggtcgcggtaacgttggacgagggggt
tttactggagatccgacgacggcgagtcaagtttctggcgggagaggtcgtggtaacgtc
ggacgtgggggtttcaccggagctccgacggcgagtcaagttgttccttctgttgcgtct
tcttctaagacgatggtggtggcttctgcttctgcttcttcgtctaaggaggagaggacg
gttgttacggaggtttctgacgcggctgcggctttggcgaaggttcagatttctccgccg
gagacgaaaccggagtctactcttcctccgtcgtcgtcaaaggctgtgccgcttcagtta
cgaccagggcgtggcactgttgggaggaaaatcactgttcgtgcgaatcatttccttgtt
caagtcgccgatcgtgatctctaccattacgatgttacgatcaatcctgaggtgatatca
aagactgtgaacaggaacgtgatgaaagctctggttagtatgtataaagagtctcacttg
ggagggaagtctcctgcgtatgatggaaggaaaagcatctacactgctggtgctttacct
tttgaatccaaagagtttgttgtggatctgactgaaaaattagctgatggttctcctggg
aaggatagaaagtttaaagttgctataaagcaggtggcttcaagacctgatctttatcag
ttgcaacagtttctgcgtcagaggcaaagagaggctccgtatgatgttatccaactgctg
gatgttgttctaagggatcagccttctaaagattatgtctctgttgggaggtcttttttc
agcactgtttttggtaagggtgagcttggagatggtgttgagtactggagaggctatttc
caaagtctaaggttaactcagatgggcctgtctcttaacattgacgtttcagcaagatcg
ttctatgaacccattgttgtcacagactttattagcaagtttctgaatataagggacatg
agcagaccacttaatgactcagataggctcaaggtgaagaaagttttgaagacagtaaaa
gttaagttgctacattggaagaacggaaaaactgccaagattactgggatttccacctgt
cccatcagtcagctaaggttcactttagaggacaagtcagagaagacggttgtacaatat
ttttttgaaagatataatcatagggtgagatacccggctctacctgctatccaaactggg
aatgactcaagacctgtctacatacccatggaactatgtcaaattgttggagagcagcga
tacacgaaaaggctcaatgagaagcaagtgacggcattgttaaaagctacctgccaacga
cctgaagaaagagagagatcaatacaaagattggttgtgggaaataaatatgacagccct
cttgtgaaggagtttgggatgtcagtgacttcccaactagcctcgattgaagctcgtgta
cttcctccaccaatgttgaagtaccatgatagtggtagagagaaaatggtaaatccgagg
caaggacagtggaacatgattaacaagaaaatggttaatggagcacgtgttgatcgttgg
acttgcgtaaatttctctcggcgaattgaccaacgtttacccgaagagttctgctatcag
ctgactgagatgtgtgtcagtaaaggaatgcaatttaatccagcacctgttattccactc
atctctgatccgcgtcaatcaatcgaggaagctcttcacgatattcacaaaagggcagct
ggtatccaactactgattgtcatattacctgacgtgactggatcatacggaaaaatcaaa
aggatctgtgaaacagaattggggatcgtctctcagtgttgtcaaccaagacaagttgtt
aaactcaataatcagtacatggaaaatgttgccttgaagattaacgtcaagactggggga
aggaacactgttctgaatgatgctatcagaagaaacatacctcttattactgatcgccca
accataatcatgggtgctgatgtgactcacccgcaacctggagaggactcgagtccttct
attgctgctgttgtagcctcaatggactggcctgaaataacaaaataccgagcattagtt
tctgctcaggctcatagggaagaaatcatccaggacctgtataagctggaacaggatcca
cagcgagggttaatccactctggtttaataagagaacatttcatagcattcaggaaggct
acggggcaaataccttcgaggatcatattctaccgtgatggtgtcagtgaagggcagttc
aaccaggttcttttccatgagatgaatgctatacgcaaggcttgtaactctctccagaag
gattatcttcctcgcgtcactttcgtaatagtccagaaacgacaccacactcgtttgttc
cctgctgaacacgggaatcgtgatatgactgataagagtggcaatattcttccaggtact
gtggttgacactcaaatctgtcatccaaatgagtttgacttctatttgaacagccacgct
ggtatacagggaacaagcaggccggcgcactaccatgtgctttacgacgagaacggtttc
tcagctgatgcaatgcaaacactaaccaacaacctttgctacacgtatgcaaggtgcact
aaagcagtgtcgattgtgccaccagcttactatgcgcacttggctgctttccgagctcgc
tattacatggagagtgagttctcagatggaggctcgagcaggtcgaggaacacgaccaca
actgcaggtgcagtcgcttcgaagctcccagcagtaaaagacaacgtcaaggatgtgatg
ttttattgctga
DBGET
integrated database retrieval system
