Capsella rubella (pink shepherd's-purse): 17889291
Help
Entry
17889291 CDS
T02984
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 3 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
17889291
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
crb04040
]
17889291
Ion channels [BR:
crb04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
17889291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
17889291
NCBI-ProteinID:
XP_006293455
UniProt:
R0HQU5
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
MIEMMNPRRNKFVRLKKNDAYSTDNTSTRPSVTSVMRTVRRSFEKGSEKIRNFKQPLSFR
LRPRKNNKENKKKILIRVMNPNDSYLQNWNKIFLLLSVVALAFDPLFFYIPVVNPDKFCL
SLDDKLQTIACVFRTFIDAFYVVHMLFQFHTGFITPASRGFGRGELNVNSKDIALRYLRS
YFLIDLLSILPIPQIVVLAIVPKVARPSSLVAKEMLKWVIFCQYIPRIARIYPLSKEVTR
TSGLVTETAWAGAALNLFLYMLASHVFGSFWYLISIERKDRCWREACKEKEREGCIHALL
YCKPTGENNHLFLNGSCNVIDPEEIKDPTIFNFGIFADALQSRIVETRDFPKKFSYCFWW
GLRNLSALGQNLKTSTFEGEIIFAIIICVSGLVLFALLIGNMQKYLQSTTVRVEEMRVKR
RDAEQWMSHRMLPDDLKDRIRKYEQYKWQETKGVEEEALLSSLPKDLRKDIKRHLCLKLL
KKVSWFQAMDDRLLDALCDRLKTVLYTENSYIVREGEPVEDMLFIMRGNLISATTYGGRT
GFFNSVTLVAGDFCGDLLTWALDPLSSHLPISSRTVQAKTEVEGFVLSADDLKFVATQYR
RLHSKQIRQMFRYYSVQWQTWAACFIQAAWKRHCRRKLSKALREEEGKLHNTLQNDADSG
CGNKLNLGAAIYASRFASHALRNLRANAAARNSRFPHMLSLLPQKPADPEFPMDES
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatagagatgatgaatccccgaagaaacaaattcgtaaggttgaagaaaaatgatgcg
tattctaccgacaacactagtactagaccatcagtaacttcagtcatgagaaccgttaga
cgaagcttcgaaaagggctcagagaaaatcagaaactttaagcagccgttgagctttcgt
cttcgtccacggaagaataataaagaaaacaagaagaagatactaataagagtgatgaat
ccaaacgactcttatcttcaaaactggaacaagatcttcttgcttctctctgttgttgct
ttagcctttgatcctctgtttttctatatccccgtggtgaatcccgacaaattctgtctt
agcctagacgataaactccagacaatcgcttgcgttttccgcactttcatcgacgctttc
tatgttgttcacatgctgtttcagtttcatacaggtttcatcactcctgcttctcgtggt
ttcggtagaggagagcttaatgtgaattctaaagatatcgccttaagatacctccgctca
tacttcttaatcgatcttctttcgatcctgcctattccgcagatagttgttctagctatc
gttccaaaggtggcacgaccatcctcgctggtagcaaaagagatgttgaaatgggtaata
ttttgccaatatattccgaggatagcacggatctatccgctttcgaaagaagtaacaaga
acttctggtttggttactgaaactgcttgggctggggctgcgttaaacctattcctctac
atgttagctagccatgtgtttgggtctttttggtacttgatttcgatagaaagaaaagat
agatgttggcgtgaagcgtgtaaagagaaagagagagagggatgcattcatgcattatta
tactgtaaaccaacaggggaaaacaatcatctgtttttaaacggttcatgtaacgtgatc
gatccagaagaaataaaagacccgaccattttcaactttggtatattcgctgatgcgttg
cagtctagaattgtggagacaagagatttccccaagaagttttcctattgtttctggtgg
ggtctccgcaatcttagtgctttgggacaaaacttgaagacgagtacctttgaaggggag
atcatttttgccattatcatttgtgtctctggactagtcttgtttgctctactcattgga
aatatgcagaaatatttgcaatcaactacggtaagagttgaggaaatgagagtaaaaagg
agagatgcagagcaatggatgtctcatcgtatgttgccagacgatctgaaagatcgtatc
cgtaaatacgagcagtataaatggcaagagaccaaaggtgttgaggaagaagctcttctc
tctagtctcccaaaagatctcagaaaggacattaaacgccatctttgtctcaaattgctc
aaaaaggtatcttggtttcaagctatggacgatcgattactagatgctttatgtgatcgt
ctcaaaacggttctttacacagagaacagttacatcgtgcgtgaaggtgaaccagtggaa
gatatgttgtttataatgagaggaaatctaataagcgcgacgacttatggtggcagaact
ggttttttcaattcggttaccttagttgctggtgatttctgtggagatcttctcacttgg
gcattagatcctctcagttcccacttacctatctctagtagaaccgttcaagctaagaca
gaagtcgaaggctttgttctctcagctgatgatctcaagtttgtcgctactcagtatcgt
cgcctccatagcaagcaaatccgacaaatgttcaggtattattcggtgcaatggcagaca
tgggcagcgtgttttatacaagcagcatggaaaagacattgtagaaggaagctctcaaag
gctttacgtgaagaagaaggcaagctacataacactttacagaacgatgctgattcagga
tgtggcaataaacttaacttaggtgctgcaatttatgcgtcgagatttgcttctcatgct
ctgaggaacctaagggcaaatgcagcagcacgcaattctagatttcctcatatgctatct
ttgttgcctcagaaaccagccgatcctgagtttcctatggatgaaagctaa
DBGET
integrated database retrieval system
