Capsella rubella (pink shepherd's-purse): 17889331
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Entry
17889331 CDS
T02984
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00280
Valine, leucine and isoleucine degradation
crb00650
Butanoate metabolism
crb01100
Metabolic pathways
crb04146
Peroxisome
Module
crb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
17889331
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
17889331
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
17889331
Enzymes [BR:
crb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
17889331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
17889331
NCBI-ProteinID:
XP_006294144
UniProt:
R0FVT4
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MQWNGVRRAHSMWCKSLTNKTHLHHPSIPVLHFLTTMSSLEEPLGFDKLPSMSTIDRIQR
FSSGACRPRDDFGMGHRWIDGRDCSTSNSCIDDDRSFGKESFPWRRHTRKLSEGELHLIR
NISVSGRTSTVSGILRESRSFKEHKYSTLSNENSTPHINHKISKGIPKFVKIVEVGPRDG
LQNEKNIVPTCIKVELIQRLVSAGLSVVEATSFVSPKWVPQLADAKDVMDAVNTLDGARL
PVLTPNLKGFEAAVSAGAKEVAIFASASESFSLSNINCTIEDSLLRYRAVTTAAKEHGIP
VRGYVSCVVGCPVEGAVPPSKVAYVVKELHDMGCFEISLGDTIGIGTPGSVVPMLEAVMA
VVPADKLAVHFHDTYGQALANILMSLQMGISIVDSSIAGLGGCPYAKGASGNVATEDVVY
MLNGLGVQTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNRQITADASKI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcaatggaatggggtgagacgagcccattctatgtggtgcaagagtttaacaaacaaa
actcatttgcatcatccttctattccagtcttacatttcctcaccaccatgtcgagtttg
gaggagccgcttggatttgacaagttgccaagtatgagtacaattgataggattcagagg
ttttcttccggtgcttgtcggcctcgggatgatttcggcatgggacatcgttggattgat
ggaagagattgcagtacctcaaatagttgcattgatgatgatagaagttttggtaaagag
tcttttccgtggagaaggcatactcggaaattatctgaaggcgaactacatctgattcgg
aatatttcagtttcgggaaggacttctacagtttctggaattttaagggaatccagaagt
tttaaggagcataagtatagtacattgagcaatgaaaatagcactccacatataaatcat
aagatctctaaaggtataccaaagtttgtgaagattgtagaagttggtccaagggatggc
ctgcaaaatgagaaaaatatagtacccacatgtataaaggtggaactaattcagagatta
gtttctgctggattgtccgttgtcgaggctacaagttttgtatcaccaaaatgggttccc
cagcttgcagatgcaaaggatgtaatggatgctgtaaatactttagatggggctcgattg
ccggttctgacaccaaatctgaaaggctttgaagcggctgtatctgcaggtgctaaggaa
gttgcaatctttgcatcagcttctgagtcattctccttgtcaaatattaattgtaccatc
gaagacagtcttttgagatatcgtgctgttaccactgctgcaaaggagcatgggattccc
gtccgtgggtatgtatcttgcgttgtggggtgtccagtggagggagccgttccaccctcg
aaagtagcttatgttgtgaaagaactccacgacatgggctgctttgagatttctctaggt
gacacaatcgggatcggtactcctggttctgtggttcccatgctcgaagccgtgatggca
gttgtgccagcggacaagcttgctgttcatttccacgacacctatggacaagctcttgca
aacatattgatgtctctccaaatgggaataagcatagtagactcatcaattgctggacta
ggcggctgtccatatgcaaaaggagcttctggaaatgtagccacagaagatgtggtttac
atgttgaatggtttaggcgtccaaaccaatgtcgacttgggaaagctaattgcagctgga
gatttcatcagcaagcatctcggccgtcccaacggttcaaaggctgctgttgcactcaac
cgtcagattacagctgatgcttccaagatatga
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