Capsella rubella (pink shepherd's-purse): 17889418
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Entry
17889418 CDS
T02984
Name
(RefSeq) protein argonaute 6 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17889418
03036 Chromosome and associated proteins [BR:
crb03036
]
17889418
Messenger RNA biogenesis [BR:
crb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
17889418
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
17889418
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
17889418
microRNA pathway
RISC loading complex
17889418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
17889418
NCBI-ProteinID:
XP_023640946
LinkDB
All DBs
Position
Unknown
AA seq
877 aa
AA seq
DB search
METSSSLPLSPISITPEQPSHRDYAITTRLGVGTTGNPIELCTNHFNVSVRHPDVVFYQY
TVSITTENGDDVNGKGIRRKLMDQLFKTYSSDLDGKRLAYDGEKSLYTVGPLPQNEFDFQ
VILEGSFSKRDADISNGDSSSGTCKRSKCSFLPRSYKVQIHFVTKIPLKTVLVTQRGAVT
PDKSAQDALRVLDTVLRQQAAERACLLIRQAFFHNNGYSFDIGGGAKGLRGFHSSFRPTH
GGLSLNIDVSTTMIVEAGPVIEFLKANQSVESPRQIDWIKAAKMLKNMRVKASHRDMEFK
IIGLSQKPCNQQLFLMKIKDGEREEQTREITVYDYFKQTYTQPTSSAYLPCLDVGKPNRP
IYLPLEFCNLVSLQRYTKALSGRQRASLAEKSRQKPLDRIKTLNDAMHTYDKDPFLAGCG
ISIEKQMTQVEGRILKPPMLKFGKNEDFEPCNGRWNFNNKMLLEPRPIKNWAVVNFSFPC
DSSHICRELISCGMKKGIEIDRPFALVEEDPQYKKAGPVERVEKMIAKMKLKFPDPPHFI
LCVLPERKTSDIYGPWKKICLTDEGINTQCICPIKISDQYLTNVLLKINSKLGGINSLLG
IEYSYNVPLINKIPTLILGMDVSHGPPGRADVPSVAAVVGSKCWPLISRYRAAVRTQAPR
LEMIDSLFQPIENTEKGDNGIMNELFVEFYRTSRARKPKQIIIFRDGVSGSQFNQVLNIE
VDQIIKAYQRLGESDVPKFTVIVAQKKHHTKLFQAKGPENVPAGTVVDTKIVHPTNYDFY
MCAHAGIIGTSRPAHYHVLLDEIGFSPDDLQNLIHSLSYVNQRSTTATSIVAPVRYAHLA
AAQFAQFNRSEEMILEDGKVAELPRLHERVESNMFFC
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcttcatctctgccactgtcacccataagtataacaccagaacagcccagc
catcgagattatgccatcacaactagacttggagttggaactacaggcaacccaatagaa
ttgtgcaccaatcacttcaacgtttctgtgagacatccggatgtagtattttaccagtac
actgttagtatcaccacagaaaatggtgatgatgtcaatgggaaagggataagaagaaag
cttatggaccaactattcaagacttactcttctgatcttgatggtaaaaggttggcatat
gatggagagaagagtttatatactgttggtcctctgccacagaatgaatttgactttcaa
gtcatcttggaaggttcattttcaaaacgtgatgctgatatctctaatggtgatagttct
tccggtacttgcaagagatcaaaatgttctttcttgccaagaagttacaaggttcagata
cattttgttaccaaaataccattaaagactgttcttgtcactcagagaggagctgttaca
ccagataagagtgcccaggatgcacttagagtgcttgacactgttctgaggcagcaagca
gctgaaagggcatgccttttgatcaggcaggcatttttccataacaatgggtactccttt
gacattggaggaggtgcaaaaggtcttcgaggtttccactcgagctttcgtccaacccat
ggaggactctcgcttaacattgatgtgtcaacaacaatgatcgtagaagcgggtccagtt
attgaattcctgaaagccaatcaaagtgttgagtccccacgacaaatcgactggattaag
gccgcaaaaatgcttaaaaatatgcgggtaaaggcatcacaccgagacatggaatttaaa
atcataggtctaagtcagaaaccgtgcaatcagcaactgtttttgatgaagatcaaagat
ggtgaacgtgaagaacagactagagagattactgtgtatgactatttcaagcaaacttac
acacagcctacttcttctgcgtacttgccatgccttgatgttggcaagccaaatcgccct
atctatcttcctctggagttttgtaatcttgtatctctgcaacgttatacaaaagcattg
tcagggaggcaaagagcttcacttgccgaaaaatcaagacaaaaacctctagatagaatt
aaaacactcaatgatgcaatgcatacctatgacaaggacccatttttggctggatgtggc
atctcaattgaaaaacaaatgactcaagttgaaggtcggattctcaagcccccaatgctc
aagtttggcaagaatgaagattttgaaccttgcaacggacggtggaactttaacaacaag
atgcttctagaaccaagacctattaaaaactgggctgtcgtcaacttttcttttccatgc
gacagtagtcacatttgccgtgagcttataagctgtggcatgaagaaaggcattgaaatt
gatcgaccttttgcactagttgaagaagatccacagtataaaaaagcaggtcctgttgaa
agggtagaaaaaatgattgcaaagatgaagttgaaatttccagatcctcctcattttatc
ctctgtgtcctgccagaacggaaaacttctgatatctatggtccctggaagaagatttgc
ctcactgatgaagggatcaacacacagtgcatctgccctatcaagatcagtgaccaatat
ctcaccaatgtacttctgaagataaattctaagcttggaggcatcaattctctgctgggg
atagagtattcttacaacgttccattgataaacaaaattcccaccttgattttgggtatg
gatgtatctcatgggcctccaggtcgggcagatgttccttcagtagcagcggttgttggt
tcaaaatgctggcccttaatctcaaggtatagggcagctgtaagaactcaggcaccacgt
ctggagatgattgattcgctcttccaacctatcgagaacactgagaaaggagataacggt
atcatgaacgaactatttgtagagttctatcggacaagcagggcacgaaagcctaagcaa
attatcattttcagggatggtgtgagtggatcacagttcaaccaagtcttgaacatcgag
gtggaccaaataataaaggcgtatcaacgtcttggtgaatctgatgtgccaaagttcact
gtcattgtggctcagaagaagcaccacaccaagttgtttcaagctaagggtcctgaaaat
gttcctgcaggaactgttgtggacaccaagatcgtacacccgacaaactacgatttttac
atgtgtgctcatgcaggaataataggaacttcaagaccggcccattaccatgtattactt
gatgagattggtttctccccagatgacttgcagaatctgatccattccctctcctatgtc
aaccaacgtagcacaacagcaacttcgattgtggccccagtgcgatacgctcatctggca
gcagctcagtttgcgcaattcaataggtctgaagagatgatactagaggacgggaaagtt
gcagagctaccacgtctgcacgagagagtggaaagcaacatgttcttctgctga
DBGET
integrated database retrieval system
