Capsella rubella (pink shepherd's-purse): 17889460
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Entry
17889460 CDS
T02984
Name
(RefSeq) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
17889460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
crb03019
]
17889460
03009 Ribosome biogenesis [BR:
crb03009
]
17889460
Messenger RNA biogenesis [BR:
crb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
17889460
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
RNases
17889460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
17889460
NCBI-ProteinID:
XP_006294946
UniProt:
R0HE53
LinkDB
All DBs
Position
Unknown
AA seq
227 aa
AA seq
DB search
MDNLSNAFSLLAFADEDAPMASSSSSSSGKQVERVNGSTEIGDYKQPLVWIDLEMTGLNV
EEDRILEIACIVTDGNLTKSVEGPDLVVHQTKECMDKMGDWCQTHHGASGLTKKVLSSTI
SESQAEKEVTEFIKKHVGSENPQLAGNSVYVDYLFLKKYMPDLAALFPHILVDVSSVKAL
CSRWFPKERRRAPAKKNNHRAMDDIRESIKELKYYKETIFKLHKARR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctctcgaatgctttctccctactcgccttcgccgacgaagatgctccaatg
gcttcctcttcttcttcctcctccgggaaacaagtagagagagtaaatgggtcaacagag
attggagattacaagcaaccactggtctggattgacttggagatgactggtctaaatgtt
gaagaagataggatattggagattgcttgtatagttactgatgggaatttaaccaaatca
gtggagggtccagatttagttgtacatcaaacaaaagaatgtatggataaaatgggtgac
tggtgccaaactcatcatggagctagtgggttgacgaagaaagtgctctctagtacgata
agtgaaagtcaagctgagaaagaggtcactgaattcataaagaagcatgttggctctgaa
aatccacaattagctggaaactctgtctatgtagattatcttttcttaaagaagtacatg
ccagatttggctgcccttttccctcatatactcgtcgatgtcagtagcgtcaaggctcta
tgttcccgatggttcccaaaagagagaagaagagctcctgcaaagaaaaacaaccacaga
gcaatggatgatataagagaaagcataaaggagcttaagtactacaaggaaacaatattc
aaactccacaaagcaagaagatga
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