Capsella rubella (pink shepherd's-purse): 17889657
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Entry
17889657 CDS
T02984
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17889657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
crb03009
]
17889657
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
17889657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
UBA2_C
Motif
Other DBs
NCBI-GeneID:
17889657
NCBI-ProteinID:
XP_006296164
UniProt:
R0G0Z7
LinkDB
All DBs
Position
Unknown
AA seq
320 aa
AA seq
DB search
MFFDGYHYHGTTFEQSYRCYPASFIDKPQIESGDKIIMPPSALDRLASLHIDYPMLFELR
NAGIERVSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDIVRVRNVTLPKGTYVRLQPHTK
DFLDISNPKAILETALRNYSCLTTGDSIMVPYNNKKYFIDIVETKPANGISIIETDCEVD
FAPPLDYKEPERPTAPAAAKGPAKAEEVVAEPEPKFNPFTGSGRRLDGRPLAYQPPPAST
SKDKQPVVVNGNGQSSVASSSEKAARQAQGKLVFGSNSNRAPKEAAPKVEAGKETKQEEQ
EKKDEPKFQAFSGKKYSLRG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgatggatatcattatcatggaaccacctttgagcagagttatcgctgctat
ccggcatcttttattgacaagccacaaattgaaagtggtgacaagattataatgccacca
tcagcccttgatcgtctagcttctttgcatatcgactatccaatgctgtttgagcttcgt
aatgcgggaattgaacgtgtttctcactgtggggtccttgagttcattgccgaagaaggc
atgatctacatgccatactggatgatgcagaatctactgctgcaagaaggagacattgtg
agggttaggaatgtcactcttccaaagggaacttatgttagactacagcctcacacgaaa
gacttcctggatatatccaacccgaaagccatcttggagactgctttgaggaattactca
tgcctaaccactggggatagcattatggttccatacaacaacaagaaatattttatagat
atagttgaaacaaagcctgctaacggaataagcatcatagaaacagactgtgaggttgat
ttcgcacctccgcttgactacaaggagcctgaacgtcccacagcacctgctgcagccaaa
ggtccggcaaaagctgaggaggttgtggctgaacctgaaccaaagttcaaccctttcacg
ggatctggaagacggttagatgggcgacctcttgcctatcagccaccacctgcctctacc
tcaaaagacaaacagcctgttgttgttaatggtaatggacagtcatctgtagcaagtagc
tcagagaaagctgcacgacaggctcaaggaaaacttgtgtttgggtccaactcaaaccgt
gctccaaaagaggctgctcctaaggttgaagctggaaaagagacaaaacaagaagaacaa
gaaaagaaagatgagcctaagtttcaagctttcagtgggaagaagtattcattgaggggt
tga
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