Capsella rubella (pink shepherd's-purse): 17889685
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Entry
17889685 CDS
T02984
Name
(RefSeq) SWI/SNF complex subunit SWI3B isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
17889685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
crb03021
]
17889685
03036 Chromosome and associated proteins [BR:
crb03036
]
17889685
Transcription machinery [BR:
crb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
17889685
Chromosome and associated proteins [BR:
crb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
17889685
PBAF complex
17889685
GBAF(ncBAF) complex
17889685
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Myb_DNA-bind_7
RE_ScaI
BfiI_DBD
NEXCaM_BD
Motif
Other DBs
NCBI-GeneID:
17889685
NCBI-ProteinID:
XP_006294152
UniProt:
R0HP64
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MATKASDSGGSGENLPNTSSLSETTSGVTASQLTQPPSSSSEIDTIYVPSYSRWFSSTGI
DECEVRSLPEFFNSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVSDVVSIR
RVFDFLDSWGLINYSSSSSAKPLKWDDKEAVKSAGDAASEPPTTVKETAKRICNGCKSIC
SIACFVCDKYDLTLCARCYVRGNYRVGINSSEFKRVEISEESKSKWSEKEILQLLEAVMH
YGDDWKKVAPYVTGRTEKDCVSQFVKLPFGEQFVKESDSEDASEAFDQIKGSADLESGGS
DKDGSSPNKRMRLTPLADASNPIMAQAAFLSALAGTKVAEAAARAAVTALSNEDYEVEIN
ASGDPNRQEANAASGGESTRNDSERAWADAKYLIQKEEQEVEGAIKEVVEVEMKKIRDRI
VHFEKLDLEMERSRKQLEEMKNLLFTDQLNIFFHTRKARKSEDRVEC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaaagcttccgattccggtggatctggggaaaatctcccgaatacttcctct
ctatccgaaaccacgtccggagtcaccgcttcgcaattgactcaaccgccgtcttcgtct
tccgaaatcgatacaatctacgtacctagctactcccgatggttttcgtcgactggcatc
gacgaatgcgaggtccggtcactgccggagttcttcaattcgaggtcgtcttccaaaaac
cctaagttttacctttacttgaggaactcaatcatcaagcagtatagagatgaccatcct
cggaagattagcttcactgacgtacggagaactcttgtcagtgatgttgtctctattcgt
cgcgtctttgatttccttgactcttgggggcttatcaactattctagctcctcctccgct
aagccactcaagtgggacgacaaggaagctgtaaaatccgcaggagatgctgcttctgag
cctcccacaactgtcaaagaaacagccaagagaatctgtaatggctgcaaatcaatttgc
agtatagcttgtttcgtctgtgataagtatgacttgacattgtgtgcgaggtgttatgtc
cgtggtaactatcgcgttggtattaactcgtcggaatttaagcgtgttgagattagtgag
gagtcaaagtcaaagtggtccgaaaaggaaattctgcagctgctggaagctgttatgcac
tatggagatgactggaagaaggttgcaccttatgttactggtagaaccgagaaggattgt
gtttcgcagtttgtcaagcttccgtttggagaacagtttgtaaaagagtctgactctgag
gatgcttcagaggcgtttgatcagatcaagggctctgctgatcttgaatctggaggaagt
gataaggacggttcttctcccaataagcggatgagattgacacctcttgcagatgcaagc
aacccaatcatggctcaggctgcttttctttcagccttggctggcacaaaagttgcagaa
gcagcagctcgagcggcagtgacagctttatctaatgaagactacgaggttgaaataaat
gccagtggagacccaaatcgacaagaggccaatgctgcatcgggtggtgaaagcactaga
aatgactcagaaagagcttgggctgatgcgaaatatctgatccagaaggaagagcaagag
gtagaaggagccatcaaagaggttgtagaagtggagatgaagaagattcgagataggatt
gtacatttcgagaaactggatttagaaatggagagaagccggaaacaattggaggagatg
aagaatctgcttttcactgatcaattaaacattttcttccacacaagaaaggcccggaaa
tctgaagatagagtagagtgttag
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integrated database retrieval system
