Capsella rubella (pink shepherd's-purse): 17889830
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Entry
17889830 CDS
T02984
Name
(RefSeq) polygalacturonase ADPG2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00040
Pentose and glucuronate interconversions
crb01100
Metabolic pathways
Module
crb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
17889830
Enzymes [BR:
crb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
17889830
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
17889830
NCBI-ProteinID:
XP_006296029
UniProt:
R0G0K0
LinkDB
All DBs
Position
Unknown
AA seq
430 aa
AA seq
DB search
MARYSKQLVTLFLLWALLMLTWCEASRISVKGYDHSYKNSLIKRRDDITGLKSFVRASLR
TPTTVSVSEFGAKGDGETDDTQAFVNAWKKACSSNGAVNLLVPKGSTYLLKSIQFTGPCK
SILTVQIFGTLSASQKRSDYKDISKWITFDNVNDLSVEGDATGTVDGNGETWWENSCKRN
KAKPCTKAPTALTFYNSKNLRVNNLRVRNAQQIQISIEKCSNVQVSNVVVTAPADSPNTD
GIHITNTQNIRVSKSIIGTGDDCISIESGSQNVQINDITCGPGHGISIGSLGDDNTKAFV
SGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIVFQNIEMENVKNPIIIDQEYCDKSKCTS
QKSAVQVKNVVYRNISGTSASDMAITFNCSKNYPCQGIVLDKVNIKGGKATCSNANIIDK
GAVLPQCNSI
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcccgttattccaaacagcttgttacccttttcctattatgggctcttttgatgctc
acatggtgcgaagcttcgagaattagcgttaagggatatgaccattcttataaaaatagc
ttaatcaagcgaagagacgacattacgggcttgaaaagcttcgtaagagcttctttacga
actccaacgaccgttagtgtttctgaatttggagctaaaggagatggagaaaccgatgat
acacaggcgttcgtgaatgcgtggaagaaagcatgctcttcaaatggagctgttaatcta
ctagttcctaaagggagcacttatctccttaagtctattcagtttacgggtccatgcaaa
tctattcttaccgttcagatatttggaacgttatcagcatctcaaaaacgatcggattac
aaagatatcagcaaatggataacgtttgacaacgttaacgatctatctgttgagggcgac
gccaccgggactgttgacggaaatggcgaaacgtggtgggagaactcatgcaaacggaac
aaagctaagccatgcacaaaagcccccacggctcttactttctacaactcgaagaacttg
agagtgaataatctgagggtgagaaatgcgcagcagattcagatatcgattgagaaatgc
tccaacgttcaggtctctaatgtggtggtaactgcaccagcggatagtcctaacactgat
ggtattcatatcacaaacacccaaaacattagagtctccaaatccatcattggaacaggc
gatgattgtatatctattgaaagtggatcacaaaatgttcaaatcaatgatataacttgc
ggtcctggtcacggcatcagcattggaagcttgggagatgacaacacaaaggcatttgta
tcaggcgttacagtggatggtgctaagctttccggcacggacaatggagttagaatcaaa
acttaccagggaggatcaggaactgctagcaacattgtctttcagaacatagagatggag
aatgtgaagaatccgatcataatcgaccaagaatattgtgacaagagcaaatgcacttcg
cagaaatctgcggtccaagtgaagaacgtggtgtaccggaacataagcggcacaagcgcg
tcggacatggcaataacatttaattgcagcaagaactatccatgccaaggcattgtgctt
gacaaagtgaacattaagggagggaaagcaacttgcagcaatgctaatatcattgataaa
ggagctgttttgcctcaatgcaactccatttaa
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