Capsella rubella (pink shepherd's-purse): 17890038
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Entry
17890038 CDS
T02984
Name
(RefSeq) putative indole-3-acetic acid-amido synthetase GH3.9
KO
K14487
auxin responsive GH3 gene family
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
17890038
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Motif
Pfam:
GH3
GH3_C
GH3_M
Motif
Other DBs
NCBI-GeneID:
17890038
NCBI-ProteinID:
XP_006293888
UniProt:
R0FW03
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MDVMKLDYNYKGENALKELERITSKAAEVQDNILCGILERNKETEYLSKYMKGFKDILEF
KRSVPIITYKDIYPYIQRIANGEDSSLITGHPITEILCSSGTSAGEPKLMPTISEDLDRR
TFLYNLIIPIMNKYIPGLDKGKAMYLNFVKAETSTPCGLPIRAVLTSYYKSKHFQCRPYD
PFNDLTSPIQTILCEDSNQSMYCQLLAALIQRHKVMRLGAVFASAFLRAISYLEQKWSEL
CEDIRRGRLNPMITDPGCQVAMSCLLSSPNPELASEIEEICRRSSWKGILCQLWPKAKFI
EAVVTGSMAQYIPALELFSQGKIPLVCPMYASSETYFGVNVEPLSRPSDVVFTLLPNMCY
FEFIPLGKNGTLSFDLDDGEQVPCDEVVDLVNVKLGRYYELVVTTFAGLYRYRIGDVLQV
AGFYNRAPQFRFICRRNVVLSIDLDKTNEEDLHRSITLAKRKLGSNAFLAEYTSYADTSS
LPGHYVLFWEIQGKLEPKLAQECCVAVEEELDYIYRQCRTKERSIGALEIRVVKPGTFEK
LMDLIISQGGSLNQYKTPRCVKYNSATFKLLNGHVTASFFSPRDPTWVP
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaatgaagcttgattacaactacaaaggtgaaaatgctttaaaagagcttgag
aggatcacctcgaaagctgctgaagttcaagataacattttatgtgggatcttagaaaga
aacaaggagacagagtacttgagtaagtacatgaaaggctttaaggacattctggagttt
aaacgctctgtgccaattatcacgtacaaagatatctatccgtacattcagagaattgct
aatggagaagactcttctcttattactggccatcctattactgaaatattatgcagctct
gggacttctgctggagaaccaaaactaatgccgaccatttctgaagatcttgatcgccga
acttttctctacaatcttattattccgattatgaacaagtacatacctggacttgacaaa
ggaaaagcaatgtacctaaattttgtaaaggctgaaacatcaactccttgtggtttacca
atcagagctgtcctcactagttactacaagagcaagcatttccaatgcaggccgtatgat
ccattcaacgacttaaccagtccgatccaaaccatcctttgtgaagacagcaaccaaagc
atgtactgtcagctactagccgctctgattcagcgccacaaagtgatgcgtttaggagct
gtctttgcttcagcgtttctccgtgcaatctcttatctcgagcagaaatggagtgagctc
tgtgaagacatccgcagaggtcgtctgaatcccatgatcaccgatccagggtgccaagtc
gcaatgtcttgtcttttatcgtcgccgaatccagagctagctagcgagatcgaagagatc
tgcagacgctcttcgtggaaagggattctatgtcagctgtggcctaaagcaaagttcatc
gaagcagtagtgacgggctcgatggctcaatacataccagcactagagttgtttagccaa
ggcaagattccattggtttgtccgatgtatgcttcctctgagacttactttggagtcaac
gtggaaccactctcccgaccatccgacgttgttttcactctcttgcctaacatgtgctac
ttcgagtttatccctctcggcaaaaacgggacactctcttttgatctcgacgacggtgag
caagtcccctgcgatgaagtcgttgatttggtcaatgtcaaactcggtcgctactatgaa
ctggtcgtcacaactttcgcagggttgtaccgttacagaatcggggacgttcttcaagtg
gcgggattctacaacagagcaccacaattccggtttatctgcaggagaaacgtggttcta
agcatcgacttggacaaaaccaacgaagaagatctgcacaggagcataacgctagccaag
aggaagcttggcagcaacgccttcctggcggagtacacgagctacgcggacacttcatca
ctgccgggacactacgtgctcttctgggagatccaagggaagctggagccgaaactggca
caagagtgctgcgtggcggttgaagaagagctggactacatctacagacaatgcaggacg
aaagagagatcgataggggcgttagagataagagtggtgaaaccaggaacgttcgagaaa
ctgatggatctgattataagccaaggagggtcgcttaatcagtataaaacgccgagatgt
gttaagtacaacagtgcaacgttcaagctcttgaacggacacgtgaccgcttctttcttt
agccctcgtgacccgacttgggtcccgtga
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