Capsella rubella (pink shepherd's-purse): 17890175
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Entry
17890175 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: crossover junction endonuclease EME1A
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03440
Homologous recombination
crb03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
17890175
03460 Fanconi anemia pathway
17890175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17890175
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
17890175
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
17890175
NCBI-ProteinID:
XP_023640201
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MSDPILLSDSEDEDTPPPLKRARKNPTPSILNLDDDPSPPKQPPGSASTPLFVVDENPLS
DDVAVVKSSSFGSGIGVSSHREHKFSGRRVISLESDSEDSPGPGTSKKYEPVDADSWKQQ
RCELEFGSTHAAASDDDTSWMQRASFRSSPSKDAIEVDSDHENGYTSVEKMGRQKQTRSS
KTTSLSADALXEKKMLKDEKIRATEEKKLRKEREKQLKAASKAEDAEHKQSEREKQKWAK
SKDKTLKSIVALIDNKVAEESFGGPLISRLKVKGITYHINPNPIERSIVWTMTLPEDVEQ
TLPQGPKIPYVLLLYEAEDFCNLVANKELLESVSRVRDEYPSYKVCYLTNKLMSYVNKKE
RVEYKDPVNCSGWSKPPIDEALAKLTTHYDGVHSRHCVDDAEVAEHVVRLTSTLAHCQFR
KKLTRLSVCADGTYMNKNAADKHLFRESVWLKVLVAIPKVQAKYAVAVSKKYPSLKSLLE
VYMNPNMSVHDKEFILKDLKVENLVGEDGRVGEACSKRIYRVLMSEDGTIKTDDVVNGAG
SFTLPPYDLD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcccattctgctctccgacagcgaggatgaggatactccaccaccgttgaag
agggctcgaaagaatcctacaccttcgattttgaacttggatgacgatccgtcaccgccg
aagcaaccgccgggatctgcttctactccattgttcgtcgtcgacgagaatcctctctct
gatgatgtcgctgtcgtcaagtcttcttcctttggttccggtatcggagtttcttcacac
cgtgagcacaaattttccggaagacgagttatatctcttgagtcggattctgaagacagt
cctggacctgggacttcaaaaaagtatgaacccgtggatgctgattcttggaaacaacaa
cgttgtgaattggaatttggatccactcatgctgctgcttctgatgatgatactagttgg
atgcagcgagctagttttcgatcttcaccgtctaaggatgctattgaggtagattctgac
catgaaaatggatatacaagcgttgagaaaatgggtcgacagaagcagacaagaagttct
aaaactacatctctttctgctgatgcattgntcgaaaaaaagatgttaaaagatgaaaag
atccgcgctactgaagaaaagaagctaagaaaagaacgagagaaacaactgaaagctgct
tcgaaagcagaagatgctgagcataaacagtcggagagggaaaagcagaaatgggcaaag
tctaaggataaaacacttaaatctatcgtcgccttgattgacaataaagtggctgaagaa
tcctttggaggacctctcatttcgaggttgaaagtgaaaggcattacttaccatataaac
cctaatccaattgagagatccattgtgtggacaatgacacttcctgaggatgttgagcag
actttgccccaagggcccaagattccatatgttttacttttgtatgaggctgaagacttt
tgtaatcttgttgctaataaagaacttctagaaagtgtctccagagttcgtgacgaatac
ccatcttataaagtgtgctacctcaccaataagttaatgtcctacgtaaacaaaaaggag
agggttgagtacaaggaccctgtaaattgcagtggttggagtaagcctcctattgatgag
gcacttgcaaaattaactactcattatgatggagtacattccaggcattgtgtagatgat
gctgaggtggctgaacatgttgttcgtttaacaagtactttggcccattgtcaattcagg
aagaagttaactcggttatcagtatgcgctgatggtacatatatgaacaagaatgcagct
gataagcacttgtttagagagagcgtatggttgaaagtgttggtagcaataccaaaggta
caggcaaaatacgctgtagcagtgtcaaagaaatacccatccttgaagtcacttcttgag
gtttatatgaatcctaacatgtcggttcatgacaaggagtttatactaaaagacttgaaa
gtagaaaatttagtaggagaagacggaagggtaggtgaggcctgttcgaagcggatatac
agagtgcttatgtctgaagatggaaccattaagactgatgacgttgtaaatggtgctggt
tccttcacacttcctccatatgacttagactag
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