Capsella rubella (pink shepherd's-purse): 17890254
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Entry
17890254 CDS
T02984
Name
(RefSeq) phospholipase D beta 1 isoform X2
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00564
Glycerophospholipid metabolism
crb00565
Ether lipid metabolism
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
17890254
00565 Ether lipid metabolism
17890254
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
17890254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17890254
Enzymes [BR:
crb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
17890254
Membrane trafficking [BR:
crb04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
17890254
Endosome - Golgi transport
Others
Others
17890254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PLD_C
C2
PLDc
PLDc_2
Motif
Other DBs
NCBI-GeneID:
17890254
NCBI-ProteinID:
XP_006295936
UniProt:
R0HGL5
LinkDB
All DBs
Position
Unknown
AA seq
1090 aa
AA seq
DB search
MENHGPRYPYPYGQYPYPYPYPAPYRPPSSEPYPPPPTNQYNAPYYPYPPPPYATPPPPY
ASPPPHHHTSGSHSGPLDYSHNPQPSSHAGPPEYHRHSFDYQHQPSPYPYPGPPTPQPQG
NFGAYGPPPHYSYQDPAQYPPPETKPQEPPPQQTQGYPEYRRQDCLSSVGTPHDNVSNSG
SSYPPVDELLSGLHISNNQPAPSVPQLSSLPSNSWQSRPGDLYGYPNCSFPSNSHLPHLG
RVDSSNSYTPSYGSTESPHSGDMQMTLFGKGSLKVLLLHGNLDIWIYHAKNLPNMDMFHK
TLGDMFGRLPGKIEGQLSSKITSDPYVSVSVAGAVIGRTYVMSNSENPVWMQHFYVPVAH
HAAEVHFVVKDSDVVGSQLIGLVTIPVEQIYSGAKIEGTYPILNSNGKPCKPGANLSLSI
QYTPMDKLSVYHHGVGAGPDYQGVPGTYFPLRKGGTVRLYQDAHVPEGMLPGIRLDNGMS
YEHGKCWHDMFDAIRQARRLIYITGWSVWHKVKLVRDKVGPASECTLGELLRSKSQEGVR
VLLLIWDDPTSRSILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRNAGKRHSWVKQREV
GTIYTHHQKNVIVDADAGGNRRKIVAFVGGLDLCDGRYDTPQHPLFRTLQTIHKDDFHNP
TFTGNLSGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKAAKPTGIKKFKTSYDDALLRI
DRIPDILGVSDTPTVSENDPEAWHVQIFRSIDSNSVKGFPKDPKDATCKNLVCGKNVLID
MSIHTAYVKAIRAAQHFIYIENQYFIGSSYNWNAHKDIGANNLIPMEIALKIAEKIRANE
RFAAYIVIPMWPEGVPTGAATQRILYWQHKTMQMMYETVYKALVETGLEGAFSPQDYLNF
FCLGNREMVDGIDNSGTGSPSNANTPQALSRKSRRFMIYVHSKGMVVDDEYVVIGSANIN
QRSMEGTRDTEIAMGGYQPQHTWARKHSGPRGQIYGYRMSLWAEHMATLDDCFTQPESIE
CVRKVRTMGERNWKQFAAEEVSDMRGHLLKYPVEVDRKGKVRPLPGSETFPDVGGNIVGS
FIAIQENLTI
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atggagaatcacggtccacgctacccatacccttatggccagtatccatacccttaccca
tacccagctccttatagacctcccagctcagagccatatccaccaccccctaccaatcaa
tacaatgccccttattatccttacccaccacctccatatgctacaccaccaccaccatat
gcctcacccccgcctcatcaccacacttcaggttcccattctggtccattagactatagc
cacaacccacaaccatcatctcatgccggtcctccagagtatcaccgccattctttcgac
taccaacatcaaccttctccttacccttatcctggccctccaacacctcaaccccaaggt
aactttggcgcttatggcccccctcctcactattcttatcaagatccagcccaatacccc
ccacctgaaactaaaccccaagagcctcctcctcagcaaactcaaggctatccagaatat
cgtaggcaagactgtctcagttctgttggaacacctcatgataacgtaagcaattccgga
tcttcttatcctcctgttgatgaacttctcagtggtctgcatatttcgaataaccaacca
gctccctcagttccacaattatcctccctcccttccaactcttggcaaagtcgccctggg
gatttgtatggttaccctaactgctcatttccaagtaactctcatttgccacacttaggg
cgagtagattcttcaaattcttatactcctagctatggatctactgaatctccgcatagt
ggggatatgcagatgactctatttggtaaaggatcgctgaaggtcctattgttgcacggg
aatttggatatttggatctatcatgcaaagaacctcccaaatatggatatgttccataag
acactgggtgatatgtttggaagattaccaggaaaaattgaagggcaacttagcagtaag
atcaccagtgatccttatgtttctgtatcagtagcaggtgctgtgattggaagaacatat
gtcatgagcaacagcgaaaatcctgtttggatgcaacatttctatgttcctgttgctcat
catgctgcagaagttcattttgttgttaaagacagtgatgtcgtcggttcacagcttata
ggactggttacaatcccagtggaacagatatactctggtgcaaaaattgaaggaacttat
ccaattctaaacagtaatgggaagccttgtaaaccaggggcaaatttgtcattatcaatc
cagtatactcctatggacaaactcagtgtttatcatcatggagttggggcaggtcctgat
taccagggggtacctggaacatactttccgcttagaaaagggggaactgtgagattgtat
caagatgcacatgtcccagaagggatgctcccgggtataagattggacaatggaatgtct
tacgaacatgggaagtgttggcatgatatgtttgatgccatacggcaggcgaggcgatta
atttatatcacaggttggtcagtgtggcacaaagttaagctggttcgtgataaagtaggt
ccagcatcagaatgtacacttggggagctcctaagatcaaagtcccaagaaggcgtgaga
gtcctgcttttgatttgggatgacccaacttcacgaagcatcttagggtataaaacagat
ggcgttatggcaacccatgatgaggagacacggcgttttttcaaacactcctcagttcaa
gtcctgctctgtccccgaaatgctggaaagagacatagttgggtcaagcagagggaagtt
gggacaatctatacacatcaccaaaagaacgtaatagttgatgctgatgctggtggcaac
agacggaaaattgtagcttttgttggtggtcttgatctgtgtgacggccgatatgacact
ccccaacatccgttgttcaggacactacagacaattcataaagatgattttcacaacccc
acttttacgggaaacctttctggatgtccaagagagccttggcatgacttacacagtaag
atcgatggccccgctgcgtatgatgtactgaccaacttcgaggagagatggttgaaggct
gcgaagcctaccgggatcaagaagtttaagacttcctatgacgatgcgctgttaaggatt
gatagaattccagatatattaggagtttctgatactcctactgttagtgaaaacgatcct
gaggcatggcatgttcagattttccgttcaatcgactcaaactctgtgaaaggtttccca
aaggatccaaaagatgctacgtgcaagaacttggtgtgtgggaagaacgtgctgattgat
atgagcatacacacagcgtatgtcaaagccattcgtgcagcccaacactttatctatatt
gagaatcagtatttcattgggtcttcctacaactggaatgcgcataaggacataggtgcg
aataatttgattcctatggaaattgcattgaagatagctgaaaagatcagggcaaatgaa
cgttttgctgcatatattgtcattccaatgtggccagaaggtgttccaactggtgctgct
acccagaggattctatattggcagcacaagacaatgcagatgatgtatgagactgtctac
aaggcattagtggagacagggcttgaaggagcattctccccacaagattacctcaatttc
ttctgtcttgggaacagagaaatggtggatggaattgataactcaggaacagggagtcca
agcaacgcaaacactcctcaggcattgagtcggaaaagcagaagatttatgatctatgtt
cactcgaaagggatggtagttgatgatgaatacgtagtaattgggtctgcaaatataaac
caacgatcaatggaaggcacaagagatacagagattgcaatgggaggttaccagcctcaa
catacatgggcaaggaaacattccggtccacggggtcagatctatggatacagaatgtcg
ctttgggcagagcatatggcaacattagacgactgtttcactcaaccggagagtatagaa
tgtgtaagaaaagtgagaacaatgggagagaggaactggaaacagtttgcagctgaagaa
gtttcggacatgagaggacatttgttaaagtatccagtagaagttgatcggaaaggtaaa
gtccgaccacttccagggagtgagacgttcccggacgtcggaggtaacattgtcggatcg
ttcatagccatacaagagaatctaaccatttga
DBGET
integrated database retrieval system
