Capsella rubella (pink shepherd's-purse): 17890381
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Entry
17890381 CDS
T02984
Name
(RefSeq) phosphomethylpyrimidine synthase, chloroplastic
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00730
Thiamine metabolism
crb01100
Metabolic pathways
crb01240
Biosynthesis of cofactors
Module
crb_M00897
Thiamine biosynthesis, plants, AIR (+ NAD+) => TMP/thiamine/TPP
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
17890381
Enzymes [BR:
crb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
17890381
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Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-GeneID:
17890381
NCBI-ProteinID:
XP_006293820
UniProt:
R0HRT4
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MASVHSTLMSVVCNNNNKTHSAWPKLPNSSLLPGFDVAVQVPATARFKKESTTTTRATLT
FDPPTTNSERAKQRKHTIDPSSPDFQPIPSFQECFPKSTKEHKEVVHEESGNVLKVPFRR
VHLSGGEPAFDNYDTSGPQDVNPRNGLPKLRKEWIDRREKLGTPRYTQMYYAKQGIITEE
MLYCATREKLDPEFVRSEVARGRAIIPSNKKHLELEPMIVGRKFLVKVNANIGNSAVASS
IEEEVYKVQWATMWGADTIMDLSTGRHIHETREWILRNSAVPVGTVPIYQALEKVDGIAE
NLSWEVFRETLIEQAEQGVDYFTIHAGVLLRYIPLTAKRMTGIVSRGGSIHAKWCLSYHK
ENFAYEHWDDILDICNQYDVALSIGDGLRPGSIYDANDTAQFAELLTQGELTRRAWEKDV
QVMNEGPGHVPMHKIPENMQKQLEWCNEAPFYTLGPLTTDIAPGYDHITSAIGAANIGAL
GTALLCYVTPKEHLGLPNRDDVKAGVIAYKIAAHAADLAKQHPHAQAWDDALSKARFEFR
WMDQFALSLDPMTAMSFHDETLPADGAKVAHFCSMCGPKFCSMKITEDIRKYAEENGYGS
AEEAIRQGMDAMSEEFNIAKKTISGEQHGEVGGEIYLPESYVKAAQK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagtacacagtactttgatgtcggtcgtatgtaacaacaacaacaaaactcac
tccgcttggcctaaactcccaaactcgtctttgctacctggattcgatgtggctgttcaa
gttcctgctacagctcggttcaagaaggaatcaacgacaaccacacgagccactttaaca
tttgatccaccgacgactaattctgagagagctaagcagaggaaacacaccattgatcct
tcttctcctgattttcaaccaatcccatcttttcaagagtgttttcctaagagcactaaa
gaacacaaggaagttgttcatgaagaatctggtaatgtgcttaaagttccttttagacgt
gttcatttgtctggtggtgaaccagcttttgataattatgacactagtggtcctcaggat
gttaacccacgcaatgggcttcctaagctaaggaaggagtggattgatcgccgagagaag
ctaggaacaccaagatacactcaaatgtactatgctaagcaagggatcattactgaggaa
atgctctactgtgctaccagggagaagctagaccctgagtttgttagatcagaagttgcg
cgagggagggcgatcatcccttccaacaagaagcatttggagctggaaccgatgattgtt
ggtaggaagttcttggttaaggtcaatgcgaatatcggaaactctgctgttgcaagctct
attgaagaggaagtctacaaggttcagtgggcaacaatgtggggagctgatactatcatg
gatctctcaactggccgtcacatccacgagacacgtgagtggatcctaaggaattcagct
gttcctgttggtactgtgcccatttatcaagcgcttgagaaagtggatggaattgctgag
aatcttagctgggaagtcttcagagagactttgattgaacaagctgagcaaggtgtagac
tatttcacaatccatgctggggttctgctgcgttacattcccttaacagccaagcgtatg
actgggatcgtttcgcgtggtggatccattcatgctaaatggtgcttatcttaccacaag
gagaactttgcttacgagcactgggatgatatcctagacatctgtaaccagtatgatgtg
gctctttcaattggggatggtctgagacctggctcgatctatgatgctaacgacactgct
cagtttgctgagctccttactcaaggtgagctaactcgccgagcatgggagaaagatgtg
caggtgatgaatgaagggccagggcatgtcccaatgcacaagattccagagaatatgcag
aagcagttggagtggtgtaacgaggcaccattctacactcttggacctttgactactgat
attgcccctggatatgatcacattacctctgccattggcgctgccaatattggagccttg
ggcacagctcttctttgctatgtaacaccaaaagaacatcttgggctaccaaacagggat
gatgtgaaagctggggttatagcatacaagatcgccgctcatgcagctgatctagccaaa
cagcatccacatgcccaggcatgggatgatgcactgagcaaggcgcggtttgagttcaga
tggatggaccaatttgctctatccttggatcccatgactgctatgtctttccatgatgaa
actcttccagctgatggagccaaggttgctcacttttgctccatgtgtggaccaaaattc
tgctctatgaagattacagaagacatccgaaagtatgcagaggagaatggttatggtagt
gctgaagaagccatcagacaaggaatggatgctatgagtgaagagttcaacattgccaag
aaaaccattagtggagaacagcacggtgaagtaggtggagaaatctatttgccagagagc
tatgtcaaggctgctcagaaataa
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