Capsella rubella (pink shepherd's-purse): 17890642
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Entry
17890642 CDS
T02984
Name
(RefSeq) probable acyl-CoA dehydrogenase IBR3
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb00071
Fatty acid degradation
crb00280
Valine, leucine and isoleucine degradation
crb01100
Metabolic pathways
crb01110
Biosynthesis of secondary metabolites
crb01212
Fatty acid metabolism
Module
crb_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
crb_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
17890642
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
17890642
Enzymes [BR:
crb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
17890642
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APH
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_dh_N
Choline_kinase
EcKL
DUF1679
Motif
Other DBs
NCBI-GeneID:
17890642
NCBI-ProteinID:
XP_023641973
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MGSSTGDLVTRVQPAHRFDHHALFRFAADNISGFPTDPSQFKVSQFGHGQSNPTFLIEVG
SGSSSKRYVLRKKPPGKLLQSAHAVEREFQVLQALGEHTQVPVPKVFCLCTDPTVIGTAF
YIMEFMEGRIFIDPKLPNVAPERRSAIYRATAKALSSLHSADVDAIGLEKYGRRGNYCKR
QIDRWFKQYLASTSEGKPERNPKMFELVDWLRKSIPAEDSTGATSGLVHGDFRIDNLVFH
PSEDRVIGIIDWELSTLGNQMCDVAYSCMHYIVNVQLDKEHVSEGLETTGIPEGMLSMPE
FLLEYCSASGKPWPAANWKFYVAFSLFRAASIYTGVYNRWLMGNASAGERARNTGAQANE
LVETALAYIARENVLPEQPPSVQRDVGSSYESLVDGSGRFIPNKKVLELRQKLIKFMETH
IYPMESEFSKLAQSDMRWTVHPEEEKLKEMAKREGLWNLFVPVDSAARARRELAGTENNH
NIWGKSFDQLFGEGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVILRYGNKEQIS
EWLIPLLEGKIRSGFAMTEPQVASSDATNIECSIRRQGDSYVINGTKWWTSGAMDPRCRV
LILMGKTDFNAPKHKQQSMILVDMQTPGIRVKRPLTVFGFDDAPHGHAEISFENVVVPGK
NILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMAQRALSRKTFGKFIAQHGSFV
SDLAKLRVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDTAIQVHGA
AGVSSDTVLAHLWATARTLRIADGPDEVHLGTIGKLELQRASKL
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcagcacgggcgatcttgtgacacgtgttcaacctgctcatcggttcgatcac
catgctttgtttcgtttcgccgccgacaacatctccggtttcccgaccgacccatcccaa
ttcaaagtctcacagttcggacacgggcagtcgaatcccacgtttctgattgaggttggc
tcagggagttcatcgaaacgatacgttttgaggaagaagcctcctgggaagctccttcaa
tctgctcatgctgttgaaagggagtttcaggtgcttcaggctttaggtgaacatacacag
gttcctgttcctaaagtcttctgcttatgtactgaccctactgtgattgggactgcgttt
tacattatggagtttatggaaggacgcatcttcatagaccctaagttgcctaatgtagca
cctgaaaggagaagtgcgatctatcgtgcaactgctaaagccttatcatctcttcactct
gctgatgtggatgccattggtcttgagaaatatggtcggcgaggcaattactgcaaaaga
cagatagataggtggttcaaacaatatttggcttcaacaagtgaaggtaaacctgaaagg
aatccaaagatgtttgaacttgttgattggttacgcaaaagcatccctgcggaagattca
acaggagcaacatcaggccttgtacacggagatttccgtattgacaatcttgtgtttcat
ccttctgaggatcgagttattggaataattgactgggaattgtccacgcttgggaatcaa
atgtgtgatgtcgcatacagctgtatgcattacattgtgaatgttcagcttgataaggag
catgttagtgaaggtcttgaaactactggaattccggaaggaatgctttctatgccagaa
tttctcttagaatactgttctgcatcgggaaaaccatggcctgctgcaaactggaagttc
tacgtagcgttctctttgtttcgggctgcttcaatctacacgggggtgtacaacagatgg
ttaatggggaatgcttctgccggtgaacgagctcgaaatacaggggctcaagctaatgag
cttgtagagactgccttggcttatattgcacgagaaaatgttcttccagaacaacctcca
tctgttcaaagggacgtgggctcgtcgtatgaaagccttgtagatggaagcgggagattc
atccccaacaaaaaagtattggagttaaggcaaaagttgatcaagtttatggaaactcac
atctacccaatggaaagcgagttttccaaacttgctcaatcagatatgcgatggaccgtt
caccccgaggaggaaaagttaaaggaaatggcaaagagagaaggcctatggaacttattt
gttcctgtagatagtgctgctagagctagaagagaactggcgggtactgagaataatcat
aatatctggggcaagtcttttgatcaattgtttggtgagggcctcacgaacctcgagtat
ggttacctttgtgagatcatgggtcgttctgtttgggctccacaggtgtttaactgtggt
gcacctgatactggaaacatggaggtgatactgcgatatggaaataaagaacaaatttct
gaatggcttattccgttgcttgagggaaaaattcgttctggatttgctatgactgagcca
caagttgcatcgtctgatgcaaccaatattgaatgctctattcgaagacaaggtgattca
tacgtcattaatggcacaaaatggtggacaagtggagccatggatcccaggtgcagagtc
cttattctcatgggaaaaactgatttcaacgccccaaaacataagcagcagtctatgata
ttagtggacatgcagactccaggtatacgtgtgaagaggcctctcacagtgtttggtttt
gatgacgcacctcatggacatgctgaaatttcttttgaaaatgtggttgtcccgggaaag
aacattctccttggagaaggccgtgggttcgagattgcccagggtaggttaggccctgga
agattgcaccattgcatgagactgataggtgccgcagagcgtgggatggagttaatggcc
caaagagctcttagtaggaaaacttttgggaagttcattgcacagcatggttcttttgtc
tctgatcttgcaaagttgagggttgagctggaaggaactcgattgttggttctagaagct
gctgatcatctcgataagtttggaaacaaaaaagctagaggaattctcgcaatggccaag
gttgcagctccaaacatggcgttgaaggtactggacacagcaatacaagttcatggagca
gccggagtatcctccgacacagttttagctcatctgtgggctacggctagaacactgagg
attgctgatggacctgatgaggttcatcttgggaccattggcaaattagaactacagaga
gcttcaaagctttaa
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