Capsella rubella (pink shepherd's-purse): 17890695
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Entry
17890695 CDS
T02984
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb03040
Spliceosome
crb04141
Protein processing in endoplasmic reticulum
crb04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
17890695
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
17890695
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
17890695
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
crb01009
]
17890695
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
crb03041
]
17890695
03009 Ribosome biogenesis [BR:
crb03009
]
17890695
03110 Chaperones and folding catalysts [BR:
crb03110
]
17890695
04131 Membrane trafficking [BR:
crb04131
]
17890695
03051 Proteasome [BR:
crb03051
]
17890695
03029 Mitochondrial biogenesis [BR:
crb03029
]
17890695
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17890695
Protein phosphatases and associated proteins [BR:
crb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
17890695
Spliceosome [BR:
crb03041
]
Complex B
Other components
Prp19 complex
17890695
Complex C
Prp19-CDC5 complex
17890695
Ribosome biogenesis [BR:
crb03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
17890695
Chaperones and folding catalysts [BR:
crb03110
]
Heat shock proteins
HSP70 / DNAK
17890695
Membrane trafficking [BR:
crb04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
17890695
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
17890695
Proteasome [BR:
crb03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
17890695
Mitochondrial biogenesis [BR:
crb03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
17890695
Exosome [BR:
crb04147
]
Exosomal proteins
Proteins found in most exosomes
17890695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
DACNG
Motif
Other DBs
NCBI-GeneID:
17890695
NCBI-ProteinID:
XP_006297173
UniProt:
R0G3Z9
LinkDB
All DBs
Position
Unknown
AA seq
650 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRYSDPSVQADMLHWPFTVKSGPAEKPMITVNYKGEEKQFSA
EEISSMVLTKMREIAEAFLGTSVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNALENYAYNMRNTIKDEKIASKLDADDKKKIEDAIDQAIEWLDGNQLAEADEFED
KMKELESLCNPIIARMYQGAGPDMGGAGGMDDDAPAGGSGGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaaggagaaggtccagctattggtatcgatctcggtactacctactcttgc
gtcggtgtttggcaacatgaccgcgttgaaatcatcgccaacgatcagggtaaccgtacc
actccctcctacgttgctttcactgacagcgagcgtctcatcggagatgccgccaagaat
caggtcgccatgaaccctaccaacaccgtcttcgatgctaaacgtcttattggtagaaga
tacagcgatccgtctgttcaagctgatatgctgcactggcctttcacggttaagtccggt
ccagctgagaagcctatgatcacggtcaactacaagggagaggagaaacagttctctgcg
gaggagatctcgtccatggttctcaccaagatgcgcgagattgctgaagctttccttggc
acttccgttaagaacgctgtggttaccgtgcctgcttatttcaacgattctcagcgtcag
gcgaccaaggacgctggagttatctctggtctcaatgtgatgcgtatcatcaatgagcct
actgctgctgccattgcttatggtcttgacaagaaggcgtctagtgtcggcgagaagaat
gttcttatctttgatttgggaggtggtacctttgatgtttctttgcttacgattgaggaa
ggtatctttgaagtgaaggccaccgctggtgacacgcatcttggtggtgaggactttgac
aacagaatggttaaccattttgttcaggagtttaagaggaagaacaagaaggatattact
ggcaatccgagggctttgaggcggcttaggacagcttgtgagcgggccaagaggactctc
tcttcgactgctcaaacgactattgaaatcgactctctctacgagggtattgatttctac
acaaccatcacccgtgctagattcgaggagctcaacatggacttgttcaggaagtgtatg
gaaccagtggagaagtgtttgagagatgctaagatggacaagaacagcgtccacgatgtt
gtccttgttggtggctccacaagaattcccaaggtgcagcagcttttgcaagactttttc
aacgggaaagagctgtgtaaaagcattaacccggacgaggctgttgcttacggagcagct
gtccaagctgcgatcctgagcggtgaagggaacgagaaggtccaagacttgttacttctt
gatgtcactcctctgtccctgggtctggaaaccgccggtggagttatgactgtcctgatt
ccaaggaacacaaccattccgacaaagaaagagcagatattctctacctattcagacaac
cagccgggtgtactgatccaggtctacgaaggggagagagcaaggacaaaggacaacaac
cttttgggaaagttcgagctcagcggtataccacctgctccacgaggtgttccccaaatt
acggtatgtttcgacatcgacgccaatggtatcctgaatgtgtcagccgaggacaagacg
actggccagaagaacaagatcacaatcacgaacgacaagggaaggttgtccaaggaagag
atcgagaagatggtacaagaagcagagaaatacaaggcggaggatgaagaacacaagaag
aaggttgatgcaaagaacgctcttgagaactatgcatacaacatgaggaacacgatcaag
gacgagaagatcgcatctaagctggatgcagatgacaagaagaagattgaggatgcgatt
gaccaagccattgaatggttggatgggaatcagctagcggaggcagatgagttcgaggat
aagatgaaggagctcgagtctctttgcaacccaatcattgctaggatgtaccaaggtgct
gggcctgacatgggtggtgctggaggaatggatgatgacgctccagctggtggtagcggc
ggtgctggccccaagattgaagaagtcgattaa
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