Capsella rubella (pink shepherd's-purse): 17890711
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Entry
17890711 CDS
T02984
Name
(RefSeq) exocyst complex component SEC8 isoform X1
KO
K06111
exocyst complex component 4
Organism
crb
Capsella rubella (pink shepherd's-purse)
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17890711
Membrane trafficking [BR:
crb04131
]
Exocytosis
Tethering complex
Exocyst complex
17890711
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec8_N
Vps54_N
EXOC6_Sec15_N
Sec8_C
Motif
Other DBs
NCBI-GeneID:
17890711
NCBI-ProteinID:
XP_006299482
UniProt:
R0I363
LinkDB
All DBs
Position
Unknown
AA seq
1054 aa
AA seq
DB search
MGIFNGLPVPSDKTYLRDELARIDESWAAARFDSLPHVVHILTSKDREGDIHILKEQSDV
VEEVVDEVVHAYHGGFNKAIQNYSQILRLFSESTEKIGDLKHDLAEAKQSLGARNKQLHQ
LWYRSVTLRHIISLLDQIEGIAKVPSRIEKLIGDKQFYAAIQVYLQSSLMLEREGLQTVG
ALQDVRSELTKLRGALFFKILDDLHAHLYNRGEYSSVASSIYERDDEVPTTTAVAASRMS
SQPLSRRTRTLKGDSQFGVRGLTNGSYRTASNDESSSFDGHDEEDSVEHDEATTDTARNG
TDTKFLSCQLPPWLSDSTPDEFIEAVRKSDDPLHVKYLQTLVQCLCMLGKVAAAGAIICQ
KLRPTIHEIIISKIKAHVETTNLLKSACSQGDRSTAAGVHFIKGQSEAYRLSKEKPQNGI
SNSGTHLAVSPVSPLMAPGGKAQAAAKELLDSILDTIVKIFENHVVIGELLELKASQHDI
NTPKSLPTDVNWNTESEASQATGGYTISFPLTVLQSECQQLICEILRATPEAASADTAAQ
TAKLAKKAPKKDKRDAPEDGLTFTFRFTDATVSISNQGADLIRQGWGKRAPNASLEGYGS
AAVLPEQGIYLAASIYRPVLQFTDKITSMLPKKHSQLVNDGLLTFTENFVKDHLLPTMFV
DYRKGVQQAISSAAAFRPRAHTTTTYTPTVEKGRPILQGLLAIDLLAKEVLGWAQAMPKF
ATDLVKYVQTFLERTFERCRTSYMEAVLEKLSYMLIGRHDIEKLMRLDAASACLPSPLGH
AISHSEAVGTEVELSELFLSLRPIKQDNLIRDDNKLILLASLSDSLEFVADSIERLGQAV
PRAASQAEGNSRSQAASPRNLASFADEYRKLATDCLKVLRVEMQLETVFHLQEMTNREYL
EDEDAEEPDDFVISLTSQITRRDEGMAPFISGEKRNYVFGGICGIAANASIKALADMRSI
NLFGVQQICRNTIALEQAMAAIPYIDGETVQHNLDRVRTYFELLNMPFEALLAFIAEHDQ
MFTPTEYSNLLKVNVPGRDTPADAQSRLLEILSH
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggggattttcaatggtttgcctgtaccttcggataaaacttaccttagggacgagttg
gcacgaatagatgagagctgggctgctgcacgatttgactctttgccacatgttgtgcat
atcttgacgtcgaaagaccgtgaaggtgacattcatatattaaaggaacaaagtgatgtt
gtcgaggaggttgtggatgaagttgtccatgcttatcatggtggtttcaacaaggccatt
caaaactactcccagatcttgcgattatttagtgagtccactgaaaaaatcggagacttg
aagcacgatttagcagaagcaaagcagagcttgggtgctcgcaataaacaattacaccag
ttgtggtatcgttctgttacattgcggcacatcatctcacttttggatcaaatcgagggc
attgctaaggttccatctcgtattgagaagctcattggcgataaacagttttatgctgct
attcaagtgtatctccagtcgtctctgatgcttgagcgtgaggggcttcaaacggttggt
gctcttcaagatgtcagatctgagctaactaagttgcggggagctcttttcttcaaaatt
ctagatgatttgcatgcacacctatacaatagaggtgaatacagttcagttgcctcaagc
atatatgaaagagacgatgaagtaccaacaacaacagctgttgcagctagtcgaatgagc
tcacaaccactgtctcgtagaacacggacactgaaaggtgatagtcaatttggtgttaga
gggctcacaaatggttcatacagaacagcttctaatgatgaaagttcatcatttgatgga
catgatgaagaggactccgtagaacatgatgaagccaccacagatacagccaggaatggg
actgatactaaatttctttcttgccagcttccaccttggctttctgattccactcctgac
gagtttattgaagcagtaagaaagagtgatgatccactgcatgtgaagtatctacaaacc
cttgttcagtgtctctgcatgcttggcaaagttgcagctgctggtgctattatatgtcaa
aaacttcgacccacaattcatgagatcataatatccaagattaaagcacatgtggagact
acaaatttgttaaagtccgcctgtagtcagggtgatcgaagtacggctgctggagtgcat
tttatcaaaggacagtcagaggcctacaggttatcaaaagagaaacctcaaaatgggata
tcaaattcaggaactcacctggctgtgagccctgtttcgcctcttatggctcctggaggt
aaagcgcaggctgcagcgaaagaacttcttgactcaattttagatacaattgtcaagata
tttgaaaatcatgtcgtaattggagagcttttggagttaaaggcttcacaacatgacatt
aacacaccaaagtcattgcctactgatgtgaattggaacaccgagtctgaagcatcccaa
gctactggaggctacactatcagttttcccttgaccgtcttacagagtgaatgccaacaa
cttatatgtgagattctgcgagcaactcccgaagctgcttcagcagatactgctgcacaa
actgctaagcttgcaaagaaggctccgaagaaagacaaaagggatgcacctgaagatggg
ctaacatttacctttcggtttacagatgcaactgtatcgatttctaatcagggagctgat
ctcattcgtcaaggctggggaaagagggctccaaatgcatcactggaaggttatggatct
gcagctgttttgcctgaacaaggaatatatctagctgcatctatataccggcctgtcctt
cagtttacagataaaatcacctcaatgttgcccaaaaagcattcccagcttgtgaatgat
ggcttgcttacatttactgagaactttgtaaaggaccacctgttaccgacaatgtttgtg
gactacaggaaaggcgtacaacaagctatatcaagcgctgctgcatttcggccccgtgca
catacaactactacttacaccccaactgtagaaaagggacgacctatcttacaaggtctt
ttggcaatagatctccttgcaaaagaggttcttggctgggctcaagccatgcctaaattt
gctactgaccttgtgaagtatgttcagacatttcttgagaggacatttgaaagatgtcga
acatcatacatggaggctgttctagagaagctcagttacatgctaattgggaggcatgat
attgagaaattgatgcggcttgatgcggctagtgcttgtttgccatctccgcttggccat
gctatttctcactctgaggctgttggcaccgaagtagaactcagtgaactatttctgagt
ttgcgacctatcaagcaggataatctaattcgtgatgacaacaaactgattttgctagcc
tctcttagtgactcgcttgaattcgtggcagactctattgagaggcttggacaagcagtt
cctcgcgcggcaagtcaagctgaaggtaatagcagaagtcaagcagcttctcctaggaat
ctggcatcatttgcggatgagtaccgaaaacttgcgactgattgtctaaaggttcttcgt
gttgagatgcaattggaaacagtctttcatctccaggaaatgacgaatagggaatacctg
gaggatgaggatgctgaagagcctgacgactttgtgatatctcttacttcacagataacg
cgtagggatgagggaatggcgcctttcatctctggtgagaagaggaattatgtttttggt
ggcatatgtggaattgcagcaaatgcttccattaaggctttggctgacatgagatcaatc
aaccttttcggggttcaacaaatatgtcggaacacgattgcattggaacaggccatggca
gctattccatatatcgatggtgaaactgtacaacataacctggatcgtgtccgtacttac
tttgaactattaaacatgccattcgaagcgctgctcgcattcatagcagaacacgaccaa
atgtttacacccacagagtattcgaatcttctgaaggtcaatgttcctggaagagatact
cctgcagatgctcaatcccgccttttggaaattctttctcactaa
DBGET
integrated database retrieval system
