Capsella rubella (pink shepherd's-purse): 17890766
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Entry
17890766 CDS
T02984
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04142
Lysosome
crb04144
Endocytosis
crb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
17890766
04142 Lysosome
17890766
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
17890766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
crb04131
]
17890766
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
crb04147
]
17890766
Membrane trafficking [BR:
crb04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
17890766
Exosome [BR:
crb04147
]
Exosomal proteins
Proteins found in most exosomes
17890766
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
17890766
NCBI-ProteinID:
XP_023642709
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MAAANAPITMKEILTLPSVGINQQFITFTNVTMESDKYICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIEAKAKLKSHQMPEQVVFWKWI
TPKMLGLVTQNSVYHWSIEGDSEPVKMFDRTANLANNQIINYKCSPNEKWLVLIGIAPGS
PERQQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSILISFASKSFNAGQXTS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQVSHKFNLIYVITKLGLLFVYDL
ETASAIYRNRISPDPIFLTSEASSVGGFYAINRRGQVLLATVNEATIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNSYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRVAQLCEKAGLYIQSLKHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSSDWAMECMKDLLLVNLRGNLQIIVQACKEYCEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSMSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSKVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLDENNDYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLFE
EAFAIFKKFNLNVQAVNVLLDNVRSIERAVEFAFRVEEDSVWSQVAKAQLREGLVSDAIE
SFIRADDATHFLEVIRVSEDTDVYDDLVKYLLMVRQKVKEPKVDSELIYAYAKIDRLGEI
EEFILMPNVANLQNVGDRLYDEALYEAAKIIYAFISNWGKLAVTLVKLQQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLIESG
LGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWQELTYLYI
QYDEFDNAATTVMNHSPEAWEHMQFKDIVAKVANVELYYKAVHFYLQEHPDLINDLLNVL
ALRLDHTRVVDIMRKAGHLRLIKPYMIAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDSFDQIGLAQKIEKHELVEMRRVAAYIYKKAGRWKQSIALSKKDNMYKDCMETASQSGE
HELAEQLLVYFIEQDKKECFATCLFVCYDLIRPDVALELAWINNMMDFAFPYLLQFMREY
SGKVDELIKDKLEAQKEVKAKEQEEKEVMSQQNMYAQLLPLALPAPPMPGMGGGGGYGPP
PTMGGMPGMPPMPAYGMPPMGGGY
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagccaacgcccccattacgatgaaggagatcctgacgcttccgagcgtcggg
atcaatcagcaattcatcacgtttactaatgttactatggaatctgacaagtacatctgt
gtacgcgagacggcaccacaaaacagtgttgtaatcatagatatgaatatgccgatgcag
cctctaaggaggcctattactgcagactctgctcttatgaatccaaactcgaggatcctt
gccttaaaagcccaagttccaggaactactcaggatcatctacagatatttaacattgaa
gcaaaagcaaagttgaagtcgcatcagatgcctgagcaggttgtcttttggaagtggatt
acaccaaagatgttggggctggttacgcagaattccgtttaccattggtcaatcgaaggt
gattctgagccagttaagatgtttgatagaacggcaaatttggccaacaatcaaattata
aactataagtgctctcctaatgagaagtggttggttttaattggaattgctcctggctct
cctgagagacaacaattagtaaaaggaaatatgcagcttttctctgtggatcaacagcga
agccaggccctggaggcacatgctgcttcatttgcacagtttaaggttcctgggaatgag
aatccttctattcttatatcatttgcaagcaagagctttaatgctggacaanntacatca
aagttgcatgtcattgagcttggtgcccaacccggaaaaccatcttttacaaaaaagcaa
gccgatctctttttcccccctgattttgctgatgattttcctgtcgccatgcaggtctct
cacaaatttaacttgatatatgttataaccaagcttggcctgttgtttgtatacgatcta
gagactgcttctgctatctacagaaaccggattagtccagacccaatttttctgacttct
gaagcttcttcagttgggggtttctatgccattaataggcgaggacaagttcttttggct
acagtaaacgaggctaccattatacctttcattagtggccaattgaacaatttggagctt
gctgtcaatcttgctaaaagaggaaacctcccaggtgcagaaaatctggttgtccagcgg
ttccaagagttgttcgctcaaacaaagtacaaggaggctgctgagcttgctgctgaatct
cctcaaggaattctaaggacacctgatacagtggccaaattccagagtgttcctgtacaa
gctgggcaaactcctccattgttacagtattttgggacacttttaactagagggaagctc
aattcatatgagtcacttgaactatctcggcttgttgtgaaccaaaacaagaagaacctg
ctggaaaactggttggcagaggataagctagaatgcagtgaagaacttggagaccttgtc
aagactgtggataatgatcttgctctgaaaatatacatcaaagctcgggcgactccaaaa
gttgtagcagcttttgcagaaagaagggagtttgacaaaatactgatttactcaaagcag
gttgggtacacacctgattatctgtttcttctgcaaaccatactccgtacagatcctcag
ggagcagtaaattttgcattaatgatgtctcaaatggaaggaggttgtccagttgattac
aacaccattactgatctttttcttcagagaaatctgatccgagaagcgactgctttcctt
ttggatgtgctgaagccaaatttacctgagcatgcttttctacaaactaaggttctggag
atcaatttggtaacctttcctaatgtggccgatgctatattagcaaatggaatgttcagc
cactatgaccggcctcgtgtagctcaactttgtgaaaaggctggactttatattcaatca
ttgaagcattactccgagttacctgatataaaacgtgtaattgtgaacacacatgctatt
gagccacaggctcttgttgagttttttggtactctttctagcgattgggcaatggaatgc
atgaaggatctgttgctggtcaacctgagaggcaatctccagataatcgttcaggcttgc
aaggagtactgtgaacaactaggtgttgatgcatgtattaagctctttgagcagttcaag
tcatacgaagggctatactttttcctaggttcatatttgagtatgagtgaggatcctgag
attcactttaagtacattgaagcagctgccaagactggacaaatcaaggaggttgagcgt
gtaactagagagtctaacttctatgacgctgaaaagacgaaaaactttttgatggaagct
aagctgcctgatgcacgacctttgataaatgtctgcgaccgtttcggctttgtgcctgat
ctaactcattacctctacacaaacaacatgcttcgttacattgaaggttacgtacaaaag
gtgaaccctgggaatgctcccttagttgtgggacagcttcttgacgatgaatgccctgaa
gattttataaaaggcctcattctctctgttcgttcattgcttcctgttgaaccacttgtc
gaggaatgcgagaagagaaatcgtcttcgtctcctcactcagttcttggagcatctagtt
agtgagggaagccaagatgtgcatgtccataatgccttgggtaaaattatcatagacagt
aacaacaaccctgagcatttcttgaccaccaacccttactacgactctaaggtggttggt
aagtactgcgagaaacgtgatcctacccttgcagttgtggcatacagaagaggacaatgt
gacgaggagcttatcaatgtcactaacaaaaactctctgtttaagttacaagccaggtat
gtagtggagaggatggatggtgacctctgggataaggttctcgatgaaaacaatgattat
agaagacaacttattgaccaggttgtgtctactgctttacctgaaagcaagagcccggag
caggtttctgcagctgttaaagcattcatgactgctgatttgccgcacgagcttattgag
cttcttgaaaagatcgttcttcaaaattctgccttcagtgggaatttcaatctgcaaaat
ctgcttatattgactgctattaaggcagatccatcaagagttatggattacattaacagg
ctggacaactttgatggacctgctgttggagaagttgcagtcgaagcccaattgtttgag
gaagcatttgcaatcttcaagaagtttaacttaaatgttcaggctgtcaatgtattgctt
gataatgtcagaagcattgagcgggcagttgagtttgctttccgagtcgaagaagattct
gtttggagccaagtagctaaggcgcaactcagggaaggactcgtcagtgatgcaattgag
tcctttatccgtgctgatgatgccactcatttcttggaggtcatacgtgtctctgaagat
actgatgtctatgatgacttggtcaaataccttctgatggttagacagaaggtgaaagaa
cccaaggttgacagtgagcttatctatgcatatgcgaagatcgataggttaggtgagatt
gaagaattcattctgatgccaaatgttgccaatctacaaaatgttggtgatcgcctgtat
gatgaagctctctatgaggctgcaaaaataatttatgcgttcatatcaaactggggtaag
ttagctgtcacacttgtgaaattgcaacagttccaaggtgctgttgatgctgcaagaaaa
gcaaacagtgcaaagacatggaaggaagtgtgctttgcttgtgttgatgcagaggaattc
cggttggcccaaatctgtggtcttaacattatcattcaggtggatgacctggaggaagtc
agtgagtactaccagaacagagggtgcttcaatgaattaatctcacttatagagagtgga
cttgggctggaacgtgcccacatgggtatcttcaccgagttgggtgtactctatgctaga
tatcgttatgagaaacttatggaacacatcaagttattttcaactcgcctcaatattcct
aagcttatacgagcctgtgatgaacaacagcactggcaggaacttacctatctgtacatt
cagtacgatgagtttgataatgctgcgaccactgtcatgaaccattctcctgaagcttgg
gagcacatgcaattcaaagacattgttgcgaaggtagcaaatgttgaattgtactacaag
gctgtgcacttctacttgcaagagcatcctgatctaatcaacgatcttctgaacgtgctt
gcgttgcggttagaccacactcgtgttgttgatataatgcggaaggctggtcacttgcgt
cttatcaagccatacatgattgcagttcagagcaacaatgtctctgctgttaatgaggct
ctgaatgagatatatgtagaagaagaagactatgataggttgcgcgagtctattgatcta
catgacagttttgaccagattggtctcgctcagaagatcgagaaacatgagcttgttgaa
atgaggcgtgtggccgcttatatctacaagaaagcgggcagatggaagcaatcaattgca
ttatcaaagaaagacaacatgtacaaggactgtatggaaactgcttcacaatctggcgaa
catgaacttgcagaacaattactggtgtatttcattgaacaggacaaaaaggaatgcttt
gccacatgtctctttgtatgttatgacttaatccgaccagacgtggctctagaacttgcc
tggatcaacaatatgatggactttgccttcccgtatctcctccagtttatgcgagaatac
tctggcaaagtggatgagctaataaaggacaagctggaggcacaaaaagaagtgaaggcc
aaagagcaggaagagaaggaggtcatgtcccaacagaacatgtacgcccaactattacca
cttgcattacctgcaccaccgatgcctggaatgggaggtggtggtgggtatggtccgcca
ccaacaatggggggcatgccaggaatgcctcctatgccagcatatggaatgccaccgatg
ggaggcggctactaa
DBGET
integrated database retrieval system
