Capsella rubella (pink shepherd's-purse): 17890820
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Entry
17890820 CDS
T02984
Name
(RefSeq) AP-5 complex subunit zeta-1
KO
K19025
AP-5 complex subunit zeta-1
Organism
crb
Capsella rubella (pink shepherd's-purse)
Pathway
crb04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
crb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
17890820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
crb03400
]
17890820
DNA repair and recombination proteins [BR:
crb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
17890820
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPG48
TPR_AP5Z1_C
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
17890820
NCBI-ProteinID:
XP_006300173
UniProt:
R0GBV2
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MSDQEGDWNFYLRILSNSARDSTDPASDPSILQSVKKLHGFCKLENSDDLVARVYPQINK
VFQRSVASLSQSDSGTSKGLLLLAILQFFLDFGDMVLHDADPSLRTFFRSCLSREFSDSA
VAEATCEFLIANKSKLLASFPNLLPQFFPLLLKLIAWNWEKLEKSFLKIFPGLISPGSFL
PLFPSIVDLPMLVVALEKVERSSGSGSRVGGSIASIQKSAAPEMLLALMDEAYTGSTIGD
GGDDSESEDNNTIDVADPLFLELLKDENDGLAERHRASPALNAALQAAASGPRSERMKQT
LKIAPRLLDVYFSVTLRDANDSLICALIPLLMTRNSTMFPDKNFSHEIRRRLLEFVLAAF
QRSPNFIALLKKPIIDRLGEAYDDVAKRELALQLCWAIGEYGGGGESHKEAARELFESLE
LLLYENLSSSRLGLRQESGNGSRRTTQSRLLCFVVTAIAKLATYHRELLPRARVALGKVV
RSRISDARVWRRAHDYLGLMNEPGICWSVLGPSRVSEKRFPGTINWSEGGQKMVANIPFH
ILSEQGGPPFHDFAFSDVIPKN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcaagaaggagactggaatttttatctcagaatcctaagcaatagcgcgcgg
gattctacggatcctgcttctgatccatctatactacaatcagtgaagaagctacatggg
ttctgtaaattggaaaactcagatgatcttgtggctagagtttatccgcaaatcaataag
gtcttccagcgttcggttgcttcactgtctcagtccgattcagggacgtccaaaggcctt
ctcttgctagccattcttcagttttttcttgattttggggatatggttctgcacgatgct
gacccaagtttgaggactttcttccgctcgtgtcttagccgtgagttttcagatagtgct
gttgcagaggcaacttgtgaattccttattgcgaacaagagcaagctcttagcgtctttc
ccaaacttactccctcagtttttcccgttgttgcttaagctcattgcctggaattgggag
aagttggaaaagtccttcctgaagatatttcccggactaatatcacctgggtcatttctt
cctctgtttccatctattgtagacttgccaatgttggtcgtggcattagagaaagtggaa
agaagctcggggtcagggtcaagggttggaggtagcattgcttcaattcagaagagtgca
gctccagagatgcttcttgcccttatggatgaagcctatactggttcaaccatcggggat
ggaggggatgactctgaatctgaagataacaatacaatagatgtagctgaccctctgttt
ctggagcttctgaaggacgaaaatgatggtctagctgaaagacaccgcgcttctcctgca
ttgaatgcagcgctgcaggctgctgcaagtggtcctcggtcagagaggatgaagcagact
cttaagattgctccccgacttcttgatgtctactttagtgttacattgcgagatgcaaat
gactctctgatctgtgcgttaatccctctactcatgacaagaaactctacaatgtttcca
gataagaatttttctcatgagatccgtaggaggctgctggaatttgtactagctgcgttt
cagaggtctccaaatttcattgccctgttgaaaaagcctataattgaccggcttggagaa
gcttacgatgatgttgcaaagagagagttagctttacagctatgttgggcaattggagag
tatggtggcgggggagaatcacacaaggaagctgctcgcgagctttttgaaagtttagaa
ttgcttctatatgagaatctctcatcaagccgcctaggtctgagacaagagtctgggaat
ggttccagaagaacaacacagtcaagacttttgtgttttgtagtgacagctattgcaaag
cttgcaacatatcaccgggaattgttaccaagagcccgtgtcgccttgggaaaggtagta
aggtctcggatatctgatgcaagggtttggagacgagcacatgattacttgggactaatg
aacgaaccaggaatctgttggtctgtgttaggaccttcacgggtttcagaaaaacggttt
ccaggcacgataaactggagcgagggggggcaaaaaatggtcgcaaacattccatttcac
attcttagtgaacaaggaggtcctccgttccatgactttgctttctccgatgtcatcccc
aaaaactga
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